RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 BCO1Q9HAY6 547 aa22.44■■□□□ 1.18
VEGFA-230ENST00000640482 USH1CQ9Y6N9 552 aa22.44■■□□□ 1.18
VEGFA-230ENST00000640482 TEP1Q99973 2627 aaKnown RBP22.44■■□□□ 1.18
VEGFA-230ENST00000640482 AGAP5A6NIR3 686 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 CLDN24A6NM45 220 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 SULT2B1O00204 365 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 CYTIPO60759 359 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 THBDP07204 575 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 ZCCHC18P0CG32 403 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 FKBP2P26885 142 aaKnown RBP22.43■■□□□ 1.18
VEGFA-230ENST00000640482 DIO1P49895 249 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 RASGEF1BQ0VAM2 473 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 BEX5Q5H9J7 111 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 TMPPEQ6ZT21 453 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 STEAP2Q8NFT2 490 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 WDR60Q8WVS4 1066 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 ITCHQ96J02 903 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 C7orf26Q96N11 449 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 PSD2Q9BQI7 771 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 CCDC106Q9BWC9 280 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 CTPS2Q9NRF8 586 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 P2RX2Q9UBL9 471 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 CHRNA9Q9UGM1 479 aa22.43■■□□□ 1.18
VEGFA-230ENST00000640482 AKAP6Q13023 2319 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 TFPIP10646 304 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 IL7RP16871 459 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 KLK2P20151 261 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 FPR1P21462 350 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 HTR3AP46098 478 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 POLR2JP52435 117 aaKnown RBP22.42■■□□□ 1.18
VEGFA-230ENST00000640482 CXorf67Q86X51 503 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-230ENST00000640482 LRRC8CQ8TDW0 803 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 CNOT9Q92600 299 aaKnown RBP22.42■■□□□ 1.18
VEGFA-230ENST00000640482 UBTD1Q9HAC8 227 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 CALML5Q9NZT1 146 aa22.42■■□□□ 1.18
VEGFA-230ENST00000640482 HEATR5AQ86XA9 2040 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 SMAD9O15198 467 aaKnown RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 GCM2O75603 506 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 DBIP07108 87 aaKnown RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 FESP07332 822 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 RPS4Y1P22090 263 aaKnown RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 LOXP28300 417 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 IDH2P48735 452 aaKnown RBP22.41■■□□□ 1.18
VEGFA-230ENST00000640482 NR1H2P55055 460 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 ADAM8P78325 824 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 ACKR1Q16570 336 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 EPGNQ6UW88 154 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 PEX5LQ8IYB4 626 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 GABRG1Q8N1C3 465 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 PIGTQ969N2 578 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 ZHX1-C8orf76Q96EF9 292 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 ATP6V1G3Q96LB4 118 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 HS3ST6Q96QI5 342 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 SLC6A13Q9NSD5 602 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 HDGFL3Q9Y3E1 203 aa22.41■■□□□ 1.18
VEGFA-230ENST00000640482 ABCA4P78363 2273 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-230ENST00000640482 FAM234BA2RU67 622 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 TGDSO95455 350 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 UQCRBP14927 111 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 IL32P24001 234 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 CRATP43155 626 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 CLK1P49759 484 aaKnown RBP22.4■■□□□ 1.18
VEGFA-230ENST00000640482 STX1BP61266 288 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 PLAURQ03405 335 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 C6orf10Q5SRN2 563 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 WFDC8Q8IUA0 241 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 OR9I1Q8NGQ6 314 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 PIP5K1AQ99755 562 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 TPT1P8Q9HAU6 139 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 THUMPD1Q9NXG2 353 aaKnown RBP22.4■■□□□ 1.18
VEGFA-230ENST00000640482 ING1Q9UK53 422 aaPredicted RBP22.4■■□□□ 1.18
VEGFA-230ENST00000640482 MED13LQ71F56 2210 aa22.4■■□□□ 1.18
VEGFA-230ENST00000640482 PRRC2AP48634 2157 aaKnown RBP22.39■■□□□ 1.18
VEGFA-230ENST00000640482 ZNF724A8MTY0 619 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 POLR3GO15318 223 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-230ENST00000640482 KLF4O43474 513 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 PMS2P2O95744 297 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 ETFAP13804 333 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 MVDP53602 400 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 DSTNP60981 165 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 FOXD4Q12950 439 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-230ENST00000640482 P2RY6Q15077 328 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 SFRP5Q5T4F7 317 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 MRPL2Q5T653 305 aaKnown RBP22.39■■□□□ 1.17
VEGFA-230ENST00000640482 C20orf204Q6ZNR8 217 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 MTDHQ86UE4 582 aaKnown RBP22.39■■□□□ 1.17
VEGFA-230ENST00000640482 VPS33AQ96AX1 596 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 S100PBPQ96BU1 408 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 TCF7L2Q9NQB0 619 aa22.39■■□□□ 1.17
VEGFA-230ENST00000640482 TMEM247A6NEH6 219 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 FAAHO00519 579 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 AP3D1O14617 1153 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 DNPH1O43598 174 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 ADAM11O75078 769 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 ADAP00813 363 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 OR3A2P47893 321 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 POLR2HP52434 150 aaKnown RBP22.38■■□□□ 1.17
VEGFA-230ENST00000640482 CRISP3P54108 245 aa22.38■■□□□ 1.17
VEGFA-230ENST00000640482 ADGRG3Q86Y34 549 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms