RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SLC9A3P48764 834 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 EFNA3P52797 238 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 FABP5Q01469 135 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 NNATQ16517 81 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TRIM61Q5EBN2 209 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 NIPAL3Q6P499 406 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SMARCD3Q6STE5 483 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 PRR23CQ6ZRP0 262 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 KMT5CQ86Y97 462 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 LSMEM1Q8N8F7 131 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 GALNT6Q8NCL4 622 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TSLPQ969D9 159 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 PTCHD1Q96NR3 888 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 NDC1Q9BTX1 674 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TRAPPC4Q9Y296 219 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 GSTK1Q9Y2Q3 226 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SLC35F4A4IF30 521 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 PRAMEF2O60811 474 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ADAM11O75078 769 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 RFPL3O75679 317 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 PNLIPP16233 465 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 PAICSP22234 425 aaKnown RBP13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SDC2P34741 201 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TGM4P49221 684 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF141Q15928 474 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SLC35F1Q5T1Q4 408 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 MEPCEQ7L2J0 689 aaKnown RBP13.88□□□□□ -0.19
TRIM3-215ENST00000639856 LAX1Q8IWV1 398 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SIRT6Q8N6T7 355 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ZFP41Q8N8Y5 198 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 OR51G2Q8NGK0 314 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 HTRA1Q92743 480 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 SLC35B4Q969S0 331 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 FAM210AQ96ND0 272 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ENAMQ9NRM1 1142 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 CMC2Q9NRP2 79 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.88□□□□□ -0.19
TRIM3-215ENST00000639856 GMEB2Q9UKD1 530 aa13.88□□□□□ -0.19
TRIM3-215ENST00000639856 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 HCN1O60741 890 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 RBM34P42696 430 aaKnown RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 FOXK2Q01167 660 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 HNRNPA0Q13151 305 aaKnown RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 KRR1Q13601 381 aaKnown RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 FGFBP1Q14512 234 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 NPSR1Q6W5P4 371 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 PRSS58Q8IYP2 241 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 FAM181AQ8N9Y4 354 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 NACC2Q96BF6 587 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF578Q96N58 590 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 COQ7Q99807 217 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 IFT27Q9BW83 186 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 MED20Q9H944 212 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 Q9N2J8 555 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 PLEKHB1Q9UF11 243 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 SERTAD3Q9UJW9 196 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 CMAHPQ9Y471 501 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 GPR179Q6PRD1 2367 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 NUP210LQ5VU65 1888 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 NPIPB9F8W1W9 429 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 PRKNO60260 465 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 PTP4A3O75365 173 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 CT45A8P0DMV1 189 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 CT45A9P0DMV2 189 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 FOXL2P58012 376 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 DEFA1P59665 94 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 DEFA3P59666 94 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ZSWIM7Q19AV6 140 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 CT45A2Q5DJT8 189 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 VWA2Q5GFL6 755 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ARMC4Q5T2S8 1044 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF322Q6U7Q0 402 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 B3GLCTQ6Y288 498 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ACBD7Q8N6N7 88 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 SYT14Q8NB59 555 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 C16orf52Q8NHV5 167 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 ITPKCQ96DU7 683 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 MVB12AQ96EY5 273 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 G6PC3Q9BUM1 346 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 GTPBP2Q9BX10 602 aaKnown RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 PNO1Q9NRX1 252 aaKnown RBP13.87□□□□□ -0.19
TRIM3-215ENST00000639856 V9GYH0 126 aa13.87□□□□□ -0.19
TRIM3-215ENST00000639856 TRAV27A0A087WT01 109 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 A0A1B0GX78 115 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 A8MUA0 341 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 DLGAP3O95886 979 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 CLPSP04118 112 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 CELP19835 753 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 ATP12AP54707 1039 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 FUT7Q11130 342 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms