RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 SLC22A11Q9NSA0 550 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 CTSFQ9UBX1 484 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 CLEC2DQ9UHP7 191 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 NXT1Q9UKK6 140 aaKnown RBP13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SSR3Q9UNL2 185 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 PPIEQ9UNP9 301 aaKnown RBP13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SLC6A5Q9Y345 797 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 NINQ8N4C6 2090 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 LOC100506127A0A0U1RQW1 187 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 VSTM2BA6NLU5 285 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 ALG1L2C9J202 215 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TSPAN19P0C672 248 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF883P0CG24 379 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 SLC1A3P43003 542 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 GRK6P43250 576 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 MLLT10P55197 1068 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 PRPS1P60891 318 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 POU4F2Q12837 409 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TPBGQ13641 420 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 SSX1Q16384 188 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF404Q494X3 552 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TMPRSS11AQ6ZMR5 421 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 ANKRD37Q7Z713 158 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 ATG4DQ86TL0 474 aaPredicted RBP13.3□□□□□ -0.28
CHD1L-211ENST00000639534 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 OR6Q1Q8NGQ2 317 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 OR8K3Q8NH51 312 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 MCFD2Q8NI22 146 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 NUBPLQ8TB37 319 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 OMA1Q96E52 524 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TNFRSF13CQ96RJ3 184 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 COQ7Q99807 217 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TBL1XR1Q9BZK7 514 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
CHD1L-211ENST00000639534 OR51E2Q9H255 320 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 MCCC2Q9HCC0 563 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 FSCN3Q9NQT6 498 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TNFRSF10DQ9UBN6 386 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 PCDHGB2Q9Y5G2 931 aa13.3□□□□□ -0.28
CHD1L-211ENST00000639534 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 TMEM221A6NGB7 291 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 OR6C70A6NIJ9 312 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 IDSB3KWA1 339 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 M0R296 226 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NTN3O00634 580 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NDUFB5O43674 189 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ICOSLGO75144 302 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 RFPL3O75679 317 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 GP1BAP07359 652 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NAGAP17050 411 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 FUT1P19526 365 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 PGCP20142 388 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NOS3P29474 1203 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 EFNA3P52797 238 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 EMP2P54851 167 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ACTC1P68032 377 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ACTA1P68133 377 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 BDH1Q02338 343 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 LGALS3BPQ08380 585 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 CD226Q15762 336 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NDUFAF6Q330K2 333 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 PWWP2BQ6NUJ5 590 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 PLBD1Q6P4A8 553 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 AGBL5Q8NDL9 886 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 OR5L2Q8NGL0 311 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 OR51A7Q8NH64 312 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF563Q8TA94 476 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 UFD1Q92890 307 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 LMF1Q96S06 567 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 ZBTB20Q9HC78 741 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 HAO2Q9NYQ3 351 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 CARD8Q9Y2G2 431 aa13.29□□□□□ -0.28
CHD1L-211ENST00000639534 CAB39Q9Y376 341 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-211ENST00000639534 D6RAR5 112 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 IMPA2O14732 288 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 ARPC3O15145 178 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 AKAP8O43823 692 aaKnown RBP13.28□□□□□ -0.28
CHD1L-211ENST00000639534 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 LIMS3P0CW19 117 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 LIMS4P0CW20 117 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 APEHP13798 732 aaKnown RBP13.28□□□□□ -0.28
CHD1L-211ENST00000639534 PTNP21246 168 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 ABCD3P28288 659 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 OPRL1P41146 370 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 CCR4P51679 360 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 SLC26A5P58743 744 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 RNF4P78317 190 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 ITGADQ13349 1161 aa13.28□□□□□ -0.28
CHD1L-211ENST00000639534 LCN1P1Q5VSP4 162 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 573.6 ms