RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ZFP90Q8TF47 636 aa3.85□□□□□ -1.79
GABRA1-220ENST00000638159 ASPNQ9BXN1 380 aa3.85□□□□□ -1.79
GABRA1-220ENST00000638159 FAM120CQ9NX05 1096 aaKnown RBP3.85□□□□□ -1.79
GABRA1-220ENST00000638159 STK38LQ9Y2H1 464 aa3.85□□□□□ -1.79
GABRA1-220ENST00000638159 PSAT1Q9Y617 370 aa3.85□□□□□ -1.79
GABRA1-220ENST00000638159 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
GABRA1-220ENST00000638159 COL27A1Q8IZC6 1860 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 LGALS16A8MUM7 142 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ZNF814B7Z6K7 855 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DYNC1I1O14576 645 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 RAMP3O60896 148 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SOD1P00441 154 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 BRS3P32247 399 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CCR7P32248 378 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 GNALP38405 381 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 PPICP45877 212 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 PPOXP50336 477 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 EMDP50402 254 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ZNF81P51508 661 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 PNLIPRP2P54317 469 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 RPL15P61313 204 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 RHAGQ02094 409 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 NTRK2Q16620 822 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 LSM12Q3MHD2 195 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SLC36A2Q495M3 483 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 PDCD4Q53EL6 469 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 C1orf220Q5T0J3 134 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DCST1Q5T197 706 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SULT1C3Q6IMI6 304 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 C3orf33Q6P1S2 294 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 KATNAL2Q8IYT4 538 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 AGGF1Q8N302 714 aaeCLIP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 MREGQ8N565 214 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 WDTC1Q8N5D0 677 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CLDND2Q8NHS1 167 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 PPP1R35Q8TAP8 253 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 FATE1Q969F0 183 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SLC38A2Q96QD8 506 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DAPP1Q9UN19 280 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 GPC6Q9Y625 555 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SIRT4Q9Y6E7 314 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DNAJC9-AS1A6NH13 148 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DUXAA6NLW8 204 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 VAMP5O95183 116 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ANP32DO95626 131 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ONECUT2O95948 504 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 MLNP12872 115 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CXCR5P32302 372 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CASP2P42575 452 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 VDAC2P45880 294 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 NCBP2P52298 156 aaKnown RBP eCLIP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CDK16Q00536 496 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 LRRC74AQ0VAA2 488 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 MALLQ13021 153 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CBFBQ13951 182 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ZNF789Q5FWF6 425 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 METTL21CQ5VZV1 264 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 LRFN4Q6PJG9 635 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 Q6ZT83 130 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 EIF3MQ7L2H7 374 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 VSIG1Q86XK7 387 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 TUSC5Q8IXB3 177 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 RIBC1Q8N443 379 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DEFB108BQ8NET1 73 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 OR10H5Q8NGA6 315 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 OR52R1Q8NGF1 315 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 NFKBIDQ8NI38 313 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 STAG3L4Q8TBR4 150 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 DYRK2Q92630 601 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 ZNF317Q96PQ6 595 aaPredicted RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 QKIQ96PU8 341 aaKnown RBP eCLIP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 TBX15Q96SF7 602 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SORBS1Q9BX66 1292 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 GRIP2Q9C0E4 1043 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 OR51B5Q9H339 312 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 SIX2Q9NPC8 291 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 STX18Q9P2W9 335 aaKnown RBP3.84□□□□□ -1.79
GABRA1-220ENST00000638159 CAPN7Q9Y6W3 813 aa3.84□□□□□ -1.79
GABRA1-220ENST00000638159 LAMA2P24043 3122 aaKnown RBP3.84□□□□□ -1.8
GABRA1-220ENST00000638159 GOLGA8KD6RF30 607 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 AURKAO14965 403 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 LSM1O15116 133 aaKnown RBP3.84□□□□□ -1.8
GABRA1-220ENST00000638159 SHOX2O60902 331 aaPredicted RBP3.84□□□□□ -1.8
GABRA1-220ENST00000638159 AHCYP23526 432 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 MPGP29372 298 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 HPCAL1P37235 193 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 HTR3AP46098 478 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 RPS16P62249 146 aaKnown RBP3.84□□□□□ -1.8
GABRA1-220ENST00000638159 HSPB3Q12988 150 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 CDSNQ15517 529 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 TBRG1Q3YBR2 411 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 RUNDC3AQ59EK9 446 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 NANOGP8Q6NSW7 305 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 DOK3Q7L591 496 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 SLC36A1Q7Z2H8 476 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 TEX9Q8N6V9 391 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 L3MBTL4Q8NA19 623 aa3.84□□□□□ -1.8
GABRA1-220ENST00000638159 PIK3C3Q8NEB9 887 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms