RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RASSF6Q6ZTQ3 369 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 TMPRSS11FQ6ZWK6 438 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 C8orf59Q8N0T1 100 aaPredicted RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 ZNF248Q8NDW4 579 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 OR2M3Q8NG83 312 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 KCNE4Q8WWG9 221 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 ZNF524Q96C55 264 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 BPIFA2Q96DR5 249 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 FAM122AQ96E09 287 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 FAM46AQ96IP4 442 aaKnown RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 HRASLS5Q96KN8 279 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 MUS81Q96NY9 551 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 PITX2Q99697 317 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 GPA33Q99795 319 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 KLHDC3Q9BQ90 382 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 DSN1Q9H410 356 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 PROK2Q9HC23 129 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 SACM1LQ9NTJ5 587 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 UBAP1Q9NZ09 502 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 NDRG4Q9ULP0 352 aaKnown RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 GMPPBQ9Y5P6 360 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 HSPE1-MOB4S4R3N1 261 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 GMFGO60234 142 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 PIP5K1CO60331 668 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 TP53P04637 393 aaPredicted RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 IFI30P13284 250 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 SPINK2P20155 84 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 MST1P26927 711 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 EPHA2P29317 976 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 CD96P40200 585 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 TPD52P55327 224 aaPredicted RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 CDC20Q12834 499 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 PTGES3Q15185 160 aaKnown RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 SLC25A53Q5H9E4 307 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 AGAP7PQ5VUJ5 663 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 ZNF691Q5VV52 312 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 KRT80Q6KB66 452 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 ISLR2Q6UXK2 745 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 GRINAQ7Z429 371 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 THAP5Q7Z6K1 395 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 PLCZ1Q86YW0 608 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 FADS6Q8N9I5 356 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 WDSUB1Q8N9V3 476 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 SETD9Q8NE22 299 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 OR4K17Q8NGC6 315 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 PFN4Q8NHR9 129 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 TMEM41AQ96HV5 264 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 AGAP4Q96P64 663 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 APOL4Q9BPW4 351 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 UTP23Q9BRU9 249 aaKnown RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 ING2Q9H160 280 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 PTGES2Q9H7Z7 377 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 TIMMDC1Q9NPL8 285 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 MEPEQ9NQ76 525 aaPredicted RBP10.7□□□□□ -0.7
CLN6-223ENST00000637823 OSGIN1Q9UJX0 560 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 WDFY3Q8IZQ1 3526 aa10.7□□□□□ -0.7
CLN6-223ENST00000637823 A0A087WZY1 265 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 TMED7-TICAM2A0A0A6YYA0 188 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 ZAR1LA6NP61 321 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 EFCAB9A8MZ26 197 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 FAM47E-STBD1D6RA91 191 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 H3BN98 237 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 ETV2O00321 342 aaPredicted RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 GNB5O14775 395 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 SNPHO15079 494 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 TRIM3O75382 744 aaPredicted RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 CLIC3O95833 236 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 RPSAP08865 295 aaKnown RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 PRKCAP17252 672 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 MAKP20794 623 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 CNR1P21554 472 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 CHMP24386 653 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 POU1F1P28069 291 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 GGT2P36268 569 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 APOBEC1P41238 236 aaKnown RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 GPR4P46093 362 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 ZNF41P51814 821 aaPredicted RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 CHN2P52757 468 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 OC90Q02509 493 aaPredicted RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 TUBA3CQ13748 450 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 PRAMEF20Q5VT98 475 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 TUBA3EQ6PEY2 450 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 UGT2A3Q6UWM9 527 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 MDGA2Q7Z553 956 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 ZNF227Q86WZ6 799 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 MEX3DQ86XN8 651 aaKnown RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 ADGRG3Q86Y34 549 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 CLDN22Q8N7P3 220 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 PSD4Q8NDX1 1056 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 OR1J4Q8NGS1 313 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 SNIP1Q8TAD8 396 aaKnown RBP10.69□□□□□ -0.7
CLN6-223ENST00000637823 OSTF1Q92882 214 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 SGTBQ96EQ0 304 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 MRGPRX4Q96LA9 322 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 C20orf141Q9NUB4 165 aa10.69□□□□□ -0.7
CLN6-223ENST00000637823 LRFN1Q9P244 771 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms