RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 LARP4Q71RC2 724 aaKnown RBP eCLIP2.73□□□□□ -1.97
VIM-210ENST00000637053 ABHD13Q7L211 337 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MEPCEQ7L2J0 689 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 HDDC2Q7Z4H3 204 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PRUNE1Q86TP1 453 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 HAPLN4Q86UW8 402 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 KCNMB4Q86W47 210 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PARGQ86W56 976 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TMPRSS12Q86WS5 348 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TRAPPC5Q8IUR0 188 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TDHQ8IZJ6 230 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 EID3Q8N140 333 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MUC20Q8N307 709 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 TMEM251Q8N6I4 163 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MFSD9Q8NBP5 474 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 INO80EQ8NBZ0 244 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 NLGN4YQ8NFZ3 816 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 OR52L2PQ8NGH6 319 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 OR4D5Q8NGN0 318 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 OR9A4Q8NGU2 314 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 TMEM163Q8TC26 289 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 FAM110BQ8TC76 370 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PTH2Q96A98 100 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ANKRD9Q96BM1 317 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 R3HDM4Q96D70 268 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LGALS12Q96DT0 336 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MRPL48Q96GC5 212 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 FAHD2AQ96GK7 314 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 IGSF21Q96ID5 467 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 C12orf42Q96LP6 360 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZNF75AQ96N20 296 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 KLHL32Q96NJ5 620 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 IL4I1Q96RQ9 567 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 RNF2Q99496 336 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 CDCA3Q99618 268 aaPredicted RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 CCDC3Q9BQI4 270 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SLC35A5Q9BS91 424 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 C2orf88Q9BSF0 95 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 KIFC1Q9BW19 673 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SLC19A3Q9BZV2 496 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 AMBRA1Q9C0C7 1298 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 CSTL1Q9H114 145 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SLA2Q9H6Q3 261 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 EGLN3Q9H6Z9 239 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MARCH7Q9H992 704 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 IL1RL2Q9HB29 575 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MOV10Q9HCE1 1003 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 IL1RAPQ9NPH3 570 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GSN-AS1Q9NRJ2 163 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 DDX19AQ9NUU7 478 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 C1orf109Q9NX04 203 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SDHAF2Q9NX18 166 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 VAPAQ9P0L0 249 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PAK5Q9P286 719 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 EPHA6Q9UF33 1036 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 MLXQ9UH92 298 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZDHHC2Q9UIJ5 367 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ZNF225Q9UK10 706 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 IKZF2Q9UKS7 526 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ABT1Q9ULW3 272 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 MGAT4AQ9UM21 535 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 GUCA1BQ9UMX6 200 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SORCS3Q9UPU3 1222 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 SH2B3Q9UQQ2 575 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 PDE10AQ9Y233 779 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 LSM4Q9Y4Z0 139 aaKnown RBP2.73□□□□□ -1.97
VIM-210ENST00000637053 CEPT1Q9Y6K0 416 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 CDH10Q9Y6N8 788 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 ATP10DQ9P241 1426 aa2.73□□□□□ -1.97
VIM-210ENST00000637053 AFF2P51816 1311 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF532Q9HCE3 1301 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 MRC2Q9UBG0 1479 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 PPIAL4CA0A0B4J2A2 164 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TMEM8BA6NDV4 472 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 LRRC3CA6NJW4 275 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 EFCAB7A8K855 629 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 DISC1C4P0D8 188 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 PROB1E7EW31 1015 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 NEDD8-MDP1E9PL57 170 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 G3V3Y1 287 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 H0Y980 276 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 M0QZ92 97 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 DFFAO00273 331 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 TFECO14948 347 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 INPP4BO15327 924 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ZNF749O43361 778 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SGCEO43556 437 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CHP2O43745 196 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 KLRC4O43908 158 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SLC19A2O60779 497 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FRAT2O75474 233 aaPredicted RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 FCN3O75636 299 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 CEACAM4O75871 244 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 FARS2O95363 451 aaKnown RBP2.72□□□□□ -1.97
VIM-210ENST00000637053 UTS2O95399 124 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 SEC24AO95486 1093 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 ESRRBO95718 433 aa2.72□□□□□ -1.97
VIM-210ENST00000637053 AP2A1O95782 977 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms