RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CACNB4	O00305	520 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	PRODH	O43272	600 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	HYAL3	O43820	417 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	SLCO2B1	O94956	709 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CPSF4	O95639	269 aa	Known RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	IGHV2-5	P01817	119 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	WNT1	P04628	370 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CISD3	P0C7P0	127 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	LIMS3	P0CW19	117 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	LIMS4	P0CW20	117 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	HSD3B1	P14060	373 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	RCC1	P18754	421 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	AGA	P20933	346 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	HSD3B2	P26439	372 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	HTR5A	P47898	357 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	RNF144A	P50876	292 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	CD81	P60033	236 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	UBE2I	P63279	158 aa	Known RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	ELAVL3	Q14576	367 aa	Known RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	C18orf21	Q32NC0	220 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	LIPJ	Q5W064	366 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	TMEM215	Q68D42	235 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CD300LD	Q6UXZ3	194 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC36A4	Q6YBV0	504 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	NUDT18	Q6ZVK8	323 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306		Q6ZVL8	140 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	PARS2	Q7L3T8	475 aa	Known RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	TECPR1	Q7Z6L1	1165 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	DCUN1D3	Q8IWE4	304 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	LNX2	Q8N448	690 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	PMM1	Q92871	262 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	SMARCD2	Q92925	531 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	DTD2	Q96FN9	168 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	C14orf144	Q96I85	54 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CDCA3	Q99618	268 aa	Predicted RBP	10	□□□□□ -0.81
CHD2-223	ENST00000636306	ACPT	Q9BZG2	426 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	TMEM138	Q9NPI0	162 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	SMCO4	Q9NRQ5	59 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CA10	Q9NS85	328 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	OPN4	Q9UHM6	478 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	CD84	Q9UIB8	345 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	MYOF	Q9NZM1	2061 aa		10	□□□□□ -0.81
CHD2-223	ENST00000636306	FXYD6-FXYD2	A0A087WZ82	144 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	UBE2QL1	A1L167	161 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	C1orf226	A1L170	272 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	OR14I1	A6ND48	311 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	PRAMEF25	A6NGN4	478 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	NPIPB9	F8W1W9	429 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	MAN2B1	O00754	1011 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF749	O43361	778 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TXNL1	O43396	289 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	IGF2	P01344	180 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ANKRD34C	P0C6C1	535 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TYRP1	P17643	537 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	NOS3	P29474	1203 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	AGTR1	P30556	359 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	RPL3	P39023	403 aa	Known RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	SMIM11A	P58511	58 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	BLOC1S1	P78537	153 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	DGCR2	P98153	550 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	EFNB1	P98172	346 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	SEMG2	Q02383	582 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	IL10RA	Q13651	578 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TRAM1	Q15629	374 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	HNRNPA1L2	Q32P51	320 aa	Known RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	LRRC73	Q5JTD7	316 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	C9orf152	Q5JTZ5	239 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF697	Q5TEC3	545 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ANXA8L1	Q5VT79	327 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	OLFML2A	Q68BL7	652 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ETFBKMT	Q8IXQ9	262 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	CFAP206	Q8IYR0	622 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	BMPER	Q8N8U9	685 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	RELL2	Q8NC24	303 aa	Predicted RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	OR51Q1	Q8NH59	317 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TRMT10A	Q8TBZ6	339 aa	Known RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	THEM6	Q8WUY1	208 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	SMIM4	Q8WVI0	70 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	MRPL38	Q96DV4	380 aa	Known RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	NUS1	Q96E22	293 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	CNTNAP3B	Q96NU0	1288 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TMED9	Q9BVK6	235 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	JAM3	Q9BX67	310 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	MFF	Q9GZY8	342 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	FXYD6	Q9H0Q3	95 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	POLR2J3	Q9H1A7	115 aa	Known RBP	9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ABCG8	Q9H221	673 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TMEM38A	Q9H6F2	299 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	REEP4	Q9H6H4	257 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	TBC1D17	Q9HA65	648 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	HRASLS	Q9HDD0	168 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	CTPS2	Q9NRF8	586 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ABRACL	Q9P1F3	81 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	BPTF	Q12830	3046 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	PCNT	O95613	3336 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	CENPF	P49454	3210 aa		9.99	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF879	B4DU55	563 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306		E9PI62	339 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306		F5H5P2	479 aa		9.98	□□□□□ -0.81

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