RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	TRBV4-1	A0A0J9YWV2	114 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997		A0A1W2PR48	441 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PSMB10	P40306	273 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	RPS5	P46782	204 aa	Known RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CAPZA1	P52907	286 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	RAB38	P57729	211 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	STK11	Q15831	433 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PRAMEF17	Q5VTA0	474 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMEM178A	Q8NBL3	297 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	EGLN3	Q9H6Z9	239 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ICK	Q9UPZ9	632 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997		A0A1B0GTQ1	180 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TCRBV3S1	A0A5B6	114 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OTOL1	A6NHN0	477 aa	Predicted RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CD1C	P29017	333 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SELENOV	P59797	346 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TRA2B	P62995	288 aa	Known RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GAB1	Q13480	694 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	VASH2	Q86V25	355 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF595	Q8IYB9	648 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ALG14	Q96F25	216 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZPBP	Q9BS86	351 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	BTBD2	Q9BX70	525 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GORASP2	Q9H8Y8	452 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OLFM2	O95897	454 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SBK3	P0C264	359 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PGM2L1	Q6PCE3	622 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	UEVLD	Q8IX04	471 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TBC1D15	Q8TC07	691 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CHTF18	Q8WVB6	975 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NRTN	Q99748	197 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR52A5	Q9H2C5	316 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SPNS1	Q9H2V7	528 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	EXTL2	Q9UBQ6	330 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CDH10	Q9Y6N8	788 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SESN1	Q9Y6P5	492 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR6C70	A6NIJ9	312 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997		H7C1C5	153 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GADD45A	P24522	165 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMBIM6	P55061	237 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	LCN6	P62502	163 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MESP2	Q0VG99	397 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	DUSP7	Q16829	419 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NKAIN1	Q4KMZ8	207 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	RBM45	Q8IUH3	476 aa	Known RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	KDM8	Q8N371	416 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CHPT1	Q8WUD6	406 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MS4A6E	Q96DS6	147 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ELP4	Q96EB1	424 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CNN2	Q99439	309 aa	Known RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GPN1	Q9HCN4	374 aa	Predicted RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MRPS2	Q9Y399	296 aa	Known RBP	13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PCDHGA10	Q9Y5H3	936 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMEM14A	Q9Y6G1	99 aa		13.31	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TSPAN12	O95859	305 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	STAR	P49675	285 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HMBOX1	Q6NT76	420 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	RPL13AP3	Q6NVV1	102 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MED25	Q71SY5	747 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR6T1	Q8NGN1	323 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	UBTD2	Q8WUN7	234 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PRRC1	Q96M27	445 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ENAM	Q9NRM1	1142 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GRIP1	Q9Y3R0	1128 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997		I3L521	148 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ATXN7	O15265	892 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SLC16A7	O60669	478 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GIPR	P48546	466 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	BTG2	P78543	158 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	POU3F1	Q03052	451 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SLC48A1	Q6P1K1	146 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMEM71	Q6P5X7	295 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR13C2	Q8NGS9	318 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	LRRC3B	Q96PB8	259 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NAA11	Q9BSU3	229 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	DDX31	Q9H8H2	851 aa	Known RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CLCA1	A8K7I4	914 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	KDM4E	B2RXH2	506 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PLOD2	O00469	737 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ORC5	O43913	435 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MOSPD3	O75425	235 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	FXYD6P3	P58550	94 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SMCO1	Q147U7	214 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ULK3	Q6PHR2	472 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF782	Q6ZMW2	699 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SLC30A2	Q9BRI3	323 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MED20	Q9H944	212 aa		13.3	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PRRG2	O14669	202 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CASC3	O15234	703 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CISD3	P0C7P0	127 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	RIDA	P52758	137 aa	Known RBP	13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GPR85	P60893	370 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SPIN3	Q5JUX0	258 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF613	Q6PF04	617 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CNEP1R1	Q8N9A8	125 aa		13.29	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR2A1	Q8NGT9	310 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms