RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GSTA2P09210 222 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PNMA6AP0CW24 399 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 RNF224P0DH78 156 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CT45A8P0DMV1 189 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CT45A9P0DMV2 189 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 THRAP10827 490 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC2A2P11168 524 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 KRT5P13647 590 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 B4GALT1P15291 398 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CD82P27701 267 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TEAD1P28347 426 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR1E1P30953 314 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 STIP1P31948 543 aaKnown RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PPP1R2P41236 205 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC1A3P43003 542 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 RGRP47804 291 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR3A2P47893 321 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC6A12P48065 614 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CCR4P51679 360 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 DCDC1P59894 354 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 POLR2FP61218 127 aaKnown RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CCL7P80098 99 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 GNA12Q03113 381 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MFGE8Q08431 387 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ARL16Q0P5N6 197 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 DPYSQ14117 519 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 IHHQ14623 411 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SPHARQ15513 63 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF74Q16587 644 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 DUSP5Q16690 384 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CLPPQ16740 277 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 C14orf28Q4W4Y0 310 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TAF1BQ53T94 588 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CT45A2Q5DJT8 189 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CARD16Q5EG05 197 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC35E4Q6ICL7 350 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ABRAXAS1Q6UWZ7 409 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 STRADAQ7RTN6 431 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SYVN1Q86TM6 617 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 VASH2Q86V25 355 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC47A2Q86VL8 602 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 UMODL1-AS1Q8N2C9 162 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ARL14Q8N4G2 192 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TEX26Q8N6G2 289 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC185Q8N715 623 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NIPA2Q8N8Q9 360 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 KBTBD8Q8NFY9 601 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR2AP1Q8NGE2 309 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR6K2Q8NGY2 324 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC110Q8TBZ0 833 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF564Q8TBZ8 553 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 HCAR2Q8TDS4 363 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 GANCQ8TET4 914 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 UBTD2Q8WUN7 234 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR1E3Q8WZA6 343 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 KLK6Q92876 244 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NTAN1Q96AB6 310 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM159Q96B96 161 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 BPIFA2Q96DR5 249 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SENP5Q96HI0 755 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PPP1R16AQ96I34 528 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 LURAP1Q96LR2 239 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 GPR137Q96N19 417 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MCCC1Q96RQ3 725 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 IL12RB2Q99665 862 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NKX3-1Q99801 234 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SSX3Q99909 188 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PIGQQ9BRB3 760 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SYT11Q9BT88 431 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 DDA1Q9BW61 102 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TDRD1Q9BXT4 1180 aaKnown RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TM6SF2Q9BZW4 377 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ZYG11BQ9C0D3 744 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ABCG4Q9H172 646 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 GANQ9H2C0 597 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 LRRC19Q9H756 370 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP13A3Q9H7F0 1226 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 SCRT2Q9NQ03 307 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 HOMER3Q9NSC5 361 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 RMND1Q9NWS8 449 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 HACD3Q9P035 362 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF624Q9P2J8 865 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM153AQ9UHL3 310 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PILRAQ9UKJ1 303 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 BLOC1S6Q9UL45 172 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TMCC3Q9ULS5 477 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 PPP2R2CQ9Y2T4 447 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 RNF215Q9Y6U7 377 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MED13Q9UHV7 2174 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MN1Q10571 1320 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 FLNAP21333 2647 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 IGHV1OR21-1A0A087WYE8 117 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A087WZ39 114 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TRBV4-1A0A0J9YWV2 114 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 IGHV5-10-1A0A0J9YXX1 117 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 ZSCAN5CA6NGD5 496 aaPredicted RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SRRM4A7MD48 611 aaKnown RBP2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM110-MUSTN1A8MSY1 372 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 SMIM1B2RUZ4 78 aa2.12□□□□□ -2.07
SMARCB1-208ENST00000634926 TMX2-CTNND1H3BSU7 103 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms