RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LYNP07948 512 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ALDOCP09972 364 aaKnown RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 POU4F3Q15319 338 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 JAGN1Q8N5M9 183 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 GTF2H4Q92759 462 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 BPIFA2Q96DR5 249 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 COQ7Q99807 217 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 HCAR1Q9BXC0 346 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 SP140LQ9H930 580 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PARD6AQ9NPB6 346 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PCYT1BQ9Y5K3 369 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 IER3IP1Q9Y5U9 82 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PEX14O75381 377 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PPP1R3DO95685 299 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 DHRS4L1P0CG22 281 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 CLUP10909 449 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ETS2P15036 469 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 S1PR1P21453 382 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 RCVRNP35243 200 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 P2RX1P51575 399 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 PNLIPRP2P54317 469 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 FAPQ12884 760 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 B3GNT6Q6ZMB0 384 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 SLC25A43Q8WUT9 341 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-229ENST00000622668 TTC9Q92623 222 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 CCDC115Q96NT0 180 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 ADAM30Q9UKF2 790 aa8.37□□□□□ -1.07
HDAC9-229ENST00000622668 SLC16A7O60669 478 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 AKR7A3O95154 331 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 EDNRAP25101 427 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 PRPS1P60891 318 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ADAM8P78325 824 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ENTPD8Q5MY95 495 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM211Q6ICI0 200 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF793Q6ZN11 406 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 GRINAQ7Z429 371 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 AMER3Q8N944 861 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF184Q99676 751 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 RPL36Q9Y3U8 105 aaKnown RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 GPC6Q9Y625 555 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 AGAP14A8MT82 685 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 GPX3P22352 226 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SNU13P55769 128 aaKnown RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 PSPHP78330 225 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 DAG1Q14118 895 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 KLHL22Q53GT1 634 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 RPL13AP3Q6NVV1 102 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 VASH1Q7L8A9 365 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 OR8K3Q8NH51 312 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 WDR20Q8TBZ3 569 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 RND1Q92730 232 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 C3orf49Q96BT1 292 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 KLHL15Q96M94 604 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 C6orf62Q9GZU0 229 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 RNF32Q9H0A6 362 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 HDHD2Q9H0R4 259 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 CRLF2Q9HC73 371 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 CHRNA9Q9UGM1 479 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 PMS2P1A4D2B8 440 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ATP6V1G2O95670 118 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 APOC1P02654 83 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ABCD3P28288 659 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 HTR1EP28566 365 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 POU3F4P49335 361 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF169Q14929 603 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
HDAC9-229ENST00000622668 OR5W2Q8NH69 310 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF566Q969W8 418 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 DHRS1Q96LJ7 313 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SAMD8Q96LT4 415 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 OR11A1Q9GZK7 315 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SLC6A15Q9H2J7 730 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM45AQ9NWC5 275 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SSR3Q9UNL2 185 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 SLC7A11Q9UPY5 501 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 ATP23Q9Y6H3 246 aa8.36□□□□□ -1.07
HDAC9-229ENST00000622668 TRAV27A0A087WT01 109 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 LOC101059948A0A1B0GTJ6 334 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 A0A1B0GWA3 101 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 A6NIZ1 184 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 UPK1AO00322 258 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 EIF4E2O60573 245 aaKnown RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 TNFRSF21O75509 655 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 ITGAMP11215 1152 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 FGF5P12034 268 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 CDKN2CP42773 168 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 SOX2P48431 317 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 IDH3GP51553 393 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-229ENST00000622668 RAP1BP61224 184 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 RAP1AP62834 184 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 SELENOWP63302 87 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 KIF18BQ86Y91 864 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 SDF2Q99470 211 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
HDAC9-229ENST00000622668 PRO3102Q9H379 93 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms