RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OR9A2Q8NGT5 310 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 OR6X1Q8NH79 312 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PAQR8Q8TEZ7 354 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 THAP4Q8WY91 577 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 NT5C3BQ969T7 300 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ZNF582Q96NG8 517 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 SMOQ99835 787 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 TKTL2Q9H0I9 626 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 CXCL16Q9H2A7 254 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PRM3Q9NNZ6 103 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PDE7BQ9NP56 450 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 NT5MQ9NPB1 228 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 TLR8Q9NR97 1041 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 UQCC1Q9NVA1 299 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ASB6Q9NWX5 421 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 KLK14Q9P0G3 267 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 TESQ9UGI8 421 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 ANHXE9PGG2 379 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 MANBAO00462 879 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 OR10H2O60403 315 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 REM1O75628 298 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 RPP40O75818 363 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 C1GALT1C1LP0DN25 315 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ETFAP13804 333 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 HSD3B1P14060 373 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 COX7A2P14406 83 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 TACR1P25103 407 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ZNF140P52738 457 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 CRYBA2P53672 197 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 DCAF7P61962 342 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 GRB14Q14449 540 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 AFMIDQ63HM1 303 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 MSANTD1Q6ZTZ1 278 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 LINGO2Q7L985 606 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 OR51Q1Q8NH59 317 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 THEM6Q8WUY1 208 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PHYHIPLQ96FC7 376 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SLC25A51Q9H1U9 297 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PRDM13Q9H4Q3 707 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 FAM86C1Q9NVL1 165 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C19orf53Q9UNZ5 99 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 CORO2BQ9UQ03 480 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 A0A0A6YYC8 382 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 I3L1I5 382 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 FADS1O60427 444 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 MAFKO60675 156 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IL5P05113 134 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 LGALS2P05162 132 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ACP2P11117 423 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PPIBP23284 216 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 GABRR2P28476 465 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 NDUFV1P49821 464 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CCR8P51685 355 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PNLIPRP2P54317 469 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 H2BFSP57053 126 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 MAXP61244 160 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CXADRP78310 365 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 TMEM31Q5JXX7 168 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CDPF1Q6NVV7 123 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PGBD2Q6P3X8 592 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ALKAL1Q6UXT8 129 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ZNF783Q6ZMS7 281 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 MBOAT1Q6ZNC8 495 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 HFE2Q6ZVN8 426 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 NR2C2APQ86WQ0 139 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CATSPERDQ86XM0 798 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CLECL1Q8IZS7 167 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CCDC54Q8NEL0 328 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR52B4Q8NGK2 314 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 OR2G2Q8NGZ5 317 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ZNF75AQ96N20 296 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 LRFN5Q96NI6 719 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 AUNIPQ9H7T9 357 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 BCO1Q9HAY6 547 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 CCL15-CCL14A0A0B4J2E2 113 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 YIF1AO95070 293 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PAPLNO95428 1278 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ACTL6AO96019 429 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IFNA17P01571 189 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 IFNW1P05000 195 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 UCHL1P09936 223 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 PRSS56P0CW18 603 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 C5AR1P21730 350 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 SHC1P29353 583 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 XCR1P46094 333 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 MTNR1AP48039 350 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 HMGA2P52926 109 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 RPS26P62854 115 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 ZXDBP98169 803 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 SRSF11Q05519 484 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 BOP1Q14137 746 aaKnown RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 SURF2Q15527 256 aaPredicted RBP7.36□□□□□ -1.23
VPS11-209ENST00000622309 CCL15Q16663 113 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 ADNP2Q6IQ32 1131 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 TSSK4Q6SA08 328 aa7.36□□□□□ -1.23
VPS11-209ENST00000622309 UNQ6494/PRO21346Q6UXR6 183 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms