RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MERTKQ12866 999 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 RNF148Q8N7C7 305 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 ITLN2Q8WWU7 325 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-217ENST00000621474 NSL1Q96IY1 281 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 UCN2Q96RP3 112 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 COQ10BQ9H8M1 238 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 OSGIN1Q9UJX0 560 aa12.87□□□□□ -0.35
CBWD3-217ENST00000621474 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 SYT5O00445 386 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 EIF1AYO14602 144 aaKnown RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 TGM6O95932 706 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 HOXD4P09016 255 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 CALB2P22676 271 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 TACR3P29371 465 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 KDELR2P33947 212 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 SFTPDP35247 375 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 NPTX1Q15818 432 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 FXNQ16595 210 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 NRF1Q16656 503 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 POMZP3Q6PJE2 187 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 TSPYL5Q86VY4 417 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 FAM156AQ8NDB6 213 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 BHLHE22Q8NFJ8 381 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 SSC4DQ8WTU2 575 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 TRIB1Q96RU8 372 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 ARHGDIGQ99819 225 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 ARMC7Q9H6L4 198 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 CALHM2Q9HA72 323 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
CBWD3-217ENST00000621474 CD300AQ9UGN4 299 aa12.86□□□□□ -0.35
CBWD3-217ENST00000621474 A0A0G2JNJ9 132 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 B2RBV5 119 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 M0R3H8 397 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 TNFSF11O14788 317 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 UBOX5O94941 541 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 FESP07332 822 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 C8BP07358 591 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 GP1BBP13224 206 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 ME2P23368 584 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
CBWD3-217ENST00000621474 TMEM176BQ3YBM2 270 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-217ENST00000621474 RINLQ6ZS11 566 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 ESPNLQ6ZVH7 1005 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 RBM45Q8IUH3 476 aaKnown RBP12.85□□□□□ -0.35
CBWD3-217ENST00000621474 DEFB107AQ8IZN7 70 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 EID3Q8N140 333 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 C9orf106Q8NAJ2 232 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 TNIP2Q8NFZ5 429 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 OR6T1Q8NGN1 323 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 OR10D3Q8NH80 312 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 C3orf49Q96BT1 292 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 ADA2Q9NZK5 511 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 Q9UFV3 132 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
CBWD3-217ENST00000621474 A0A1W2PNR3 127 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CXCR6O00574 342 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 HSD17B1P14061 328 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 NCK1P16333 377 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 GGT1P19440 569 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TNFRSF1BP20333 461 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 HTR1EP28566 365 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TIMP3P35625 211 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 WBP2NLQ6ICG8 309 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 MTFR2Q6P444 385 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 C16orf89Q6UX73 402 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CADM2Q8N3J6 435 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 ATP6V1C2Q8NEY4 427 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 FIG4Q92562 907 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 ARL5BQ96KC2 179 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CDRT15Q96T59 188 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TAS2R1Q9NYW7 299 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TESQ9UGI8 421 aaKnown RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 EGFL7Q9UHF1 273 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 RNF6Q9Y252 685 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 HCFC1P51610 2035 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 UTP20O75691 2785 aaKnown RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TMED7-TICAM2A0A0A6YYA0 188 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 ZC3H12DA2A288 527 aaKnown RBP12.84□□□□□ -0.35
CBWD3-217ENST00000621474 CXCL13O43927 109 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 UQCRBP14927 111 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 HTR3AP46098 478 aa12.84□□□□□ -0.35
CBWD3-217ENST00000621474 EIF1AXP47813 144 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms