RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 VPS29Q9UBQ0 182 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 LIPT1Q9Y234 373 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 VDAC3Q9Y277 283 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 RNF115Q9Y4L5 304 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PTGDR2Q9Y5Y4 395 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 A0A1W2PP18 115 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 A8MV72 311 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 OVOL3O00110 214 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 AZIN1O14977 448 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PIP5K1BO14986 540 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PCDH7O60245 1069 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PLOD3O60568 738 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ADAM11O75078 769 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 COQ9O75208 318 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SUPT7LO94864 414 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SYNGR4O95473 234 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CLPTM1O96005 669 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 IL3P08700 152 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 RPS17P08708 135 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 TCN1P20061 433 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 PSMB1P20618 241 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 SLC7A2P52569 658 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CDH13P55290 713 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FAPQ12884 760 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FXNQ16595 210 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CTU2Q2VPK5 515 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 SPATS1Q496A3 300 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CYP27C1Q4G0S4 372 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 XKR7Q5GH72 579 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 MTX3Q5HYI7 312 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 LCN8Q6JVE9 175 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 OGFOD2Q6N063 350 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 MARCH3Q86UD3 253 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 GGNQ86UU5 652 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 GALNT4Q8N4A0 578 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 OR10D3Q8NH80 312 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FAM110BQ8TC76 370 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 TSPEARQ8WU66 669 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SMAP2Q8WU79 429 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 CNBD2Q96M20 576 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 HS6ST2Q96MM7 605 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 HOPXQ9BPY8 73 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 RTN4RQ9BZR6 473 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SLCO5A1Q9H2Y9 848 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ALG2Q9H553 416 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 C12orf49Q9H741 205 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 Q9N2J8 555 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 NGBQ9NPG2 151 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SLC35C2Q9NQQ7 365 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 GLRX2Q9NS18 164 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FAM120CQ9NX05 1096 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 CMTM6Q9NX76 183 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PAQR5Q9NXK6 330 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 FLRT3Q9NZU0 649 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 GIMAP2Q9UG22 337 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ZNF225Q9UK10 706 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 MRTO4Q9UKD2 239 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 TMCO1Q9UM00 188 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 GPR52Q9Y2T5 361 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 NDUFAF1Q9Y375 327 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FIS1Q9Y3D6 152 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 MAGED1Q9Y5V3 778 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 GPR45Q9Y5Y3 372 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CEPT1Q9Y6K0 416 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 A0A1B0GVG6 124 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 AQP12BA6NM10 295 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 SHISA8B8ZZ34 492 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 H3BNH8 94 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 PHF1O43189 567 aaPredicted RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 FADS1O60427 444 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 SS18L1O75177 396 aaPredicted RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 CD3EP07766 207 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 IL11P20809 199 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 SLC6A2P23975 617 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 PSMD4P55036 377 aaKnown RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 C17orf67Q0P5P2 114 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 ZNHIT3Q15649 155 aaPredicted RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 GLYR1Q49A26 553 aaPredicted RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 ADAM5Q6NVV9 412 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 EPHX4Q8IUS5 362 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 AQP12AQ8IXF9 295 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 STEAP2Q8NFT2 490 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 TWIST2Q8WVJ9 160 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 SLC9A6Q92581 669 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 TFAP2CQ92754 450 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 S100PBPQ96BU1 408 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 ANKRD60Q9BZ19 345 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 OR10A4Q9H209 315 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 VCX3AQ9NNX9 186 aa6.98□□□□□ -1.29
CLK1-215ENST00000621181 DDX18Q9NVP1 670 aaKnown RBP6.98□□□□□ -1.29
CLK1-215ENST00000621181 TCRBV5S2A0A599 114 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PDLIM1O00151 329 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TNFSF11O14788 317 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NDUFB5O43674 189 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 OR4F21O95013 312 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 H6PDO95479 791 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ANGPTL1O95841 491 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms