RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 RORAP35398 523 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 CTXN1P60606 82 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 PRPS1P60891 318 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 ERVK-25P63136 954 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 CD300CQ08708 224 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 ZMAT1Q5H9K5 638 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 PRSS41Q7RTY9 318 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 COMMD2Q86X83 199 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 TMEM151BQ8IW70 566 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 OR8D4Q8NGM9 314 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 OR4Q3Q8NH05 313 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 GRPEL2Q8TAA5 225 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 VOPP1Q96AW1 172 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 GPA33Q99795 319 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 TMEM246Q9BRR3 403 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 MCOLN1Q9GZU1 580 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 POLE3Q9NRF9 147 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 RXFP3Q9NSD7 469 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 MRPL39Q9NYK5 338 aaKnown RBP8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 FKBP7Q9Y680 259 aa8.53□□□□□ -1.04
RBFOX1-223ENST00000620507 CDHR4A6H8M9 788 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 LRRN3E7EW58 273 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 C11orf98E9PRG8 122 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 PSMD9O00233 223 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 CTNSO60931 367 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 KCNK2O95069 426 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 TBX6O95947 436 aaPredicted RBP8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 GP1BBP13224 206 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 SHC1P29353 583 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 ETV6P41212 452 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 PITPNBP48739 271 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 DEFB133Q30KQ1 61 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 ZNF658BQ4V348 819 aaPredicted RBP8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 QSOX2Q6ZRP7 698 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 ATCAYQ86WG3 371 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 MEIOBQ8N635 442 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 GALNT6Q8NCL4 622 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 NSMAFQ92636 917 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 TCTN2Q96GX1 697 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 ZNF681Q96N22 645 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 HOXD1Q9GZZ0 328 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 LRRN3Q9H3W5 708 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 LMAN1LQ9HAT1 526 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 CKLFQ9UBR5 152 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 CA14Q9ULX7 337 aa8.52□□□□□ -1.04
RBFOX1-223ENST00000620507 CCDC85CA6NKD9 419 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 KDM4EB2RXH2 506 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 LIMS3P0CW19 117 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 LIMS4P0CW20 117 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 ENDOUP21128 410 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 GDI2P50395 445 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 NRG3P56975 720 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 ANGPT1Q15389 498 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 NSDHLQ15738 373 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 METAP1DQ6UB28 335 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 IL20RBQ6UXL0 311 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 SLC35F2Q8IXU6 374 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 SLC7A5P1Q8MH63 180 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CA13Q8N1Q1 262 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 ASCC1Q8N9N2 400 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 OR5M3Q8NGP4 307 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 GHSRQ92847 366 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 DAZLQ92904 295 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 TAPBPLQ9BX59 468 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 ZNF350Q9GZX5 532 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 C11orf54Q9H0W9 315 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CMC2Q9NRP2 79 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CES1P1Q9UKY3 287 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 GBF1Q92538 1859 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 TMEM229AB2RXF0 380 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 TRIM3O75382 744 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 NTN1O95631 604 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CD2P06729 351 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CD38P28907 300 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 MNDAP41218 407 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 BAK1Q16611 211 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 NTRK2Q16620 822 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 SMUG1Q53HV7 270 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 WDR45BQ5MNZ6 344 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 NIPAL3Q6P499 406 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 CHMP1BQ7LBR1 199 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 LRRC28Q86X40 367 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 PMM1Q92871 262 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 ADOQ96SZ5 270 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 OR10A5Q9H207 317 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 MAN2C1Q9NTJ4 1040 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 MRPS2Q9Y399 296 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 DSPPQ9NZW4 1301 aa8.52□□□□□ -1.05
RBFOX1-223ENST00000620507 HMX3A6NHT5 357 aa8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 ATP1B1P05026 303 aa8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 HOXC4P09017 264 aaPredicted RBP8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 SBK2P0C263 348 aa8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 PNMTP11086 282 aa8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 GABRG2P18507 467 aa8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 MAPK3P27361 379 aaPredicted RBP8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 FAUP35544 74 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-223ENST00000620507 NUDT1P36639 197 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms