RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 DECR1Q16698 335 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 PRICKLE4Q2TBC4 344 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 QSOX2Q6ZRP7 698 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 LINC00696Q6ZRV3 163 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 HMGN2P46Q86SG4 172 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 SLC9A6Q92581 669 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 SH3YL1Q96HL8 342 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-210ENST00000619438 PLEKHA8Q96JA3 519 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 IMMP1LQ96LU5 166 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 ZBTB20Q9HC78 741 aaPredicted RBP19.75■□□□□ 0.75
SGMS1-210ENST00000619438 OSGIN1Q9UJX0 560 aa19.75■□□□□ 0.75
SGMS1-210ENST00000619438 AGAP5A6NIR3 686 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 AP3D1O14617 1153 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 AIREO43918 545 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 ALOX5P09917 674 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 TNNI3P19429 210 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 MAOAP21397 527 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 PCYT1AP49585 367 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 RGS8P57771 180 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 NCS1P62166 190 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 MGAT2Q10469 447 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 SLC13A2Q13183 592 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 TRMT12Q53H54 448 aaKnown RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 JMJD6Q6NYC1 403 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 PAPD4Q6PIY7 484 aaKnown RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 SLC15A4Q8N697 577 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 SIRT6Q8N6T7 355 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 TMEM52Q8NDY8 209 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 BRIX1Q8TDN6 353 aaKnown RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 ADAMTS18Q8TE60 1221 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 S100ZQ8WXG8 99 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 ACOT11Q8WXI4 607 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 HOXB13Q92826 284 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-210ENST00000619438 CTHRC1Q96CG8 243 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 IL4I1Q96RQ9 567 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 GPA33Q99795 319 aa19.74■□□□□ 0.75
SGMS1-210ENST00000619438 CELA2AP08217 269 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 SMSP52788 366 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 EEF1A1P68104 462 aaKnown RBP19.73■□□□□ 0.75
SGMS1-210ENST00000619438 GINS1Q14691 196 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 ZNF846Q147U1 533 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 ARMCX4Q5H9R4 360 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 IGFL3Q6UXB1 125 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 RASSF6Q6ZTQ3 369 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 ZNF619Q8N2I2 560 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 CLIP4Q8N3C7 705 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 RBMXL3Q8N7X1 1067 aaKnown RBP19.73■□□□□ 0.75
SGMS1-210ENST00000619438 RPL3LQ92901 407 aaKnown RBP19.73■□□□□ 0.75
SGMS1-210ENST00000619438 EVA1AQ9H8M9 152 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 AKIP1Q9NQ31 210 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 POLE3Q9NRF9 147 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 PRTFDC1Q9NRG1 225 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 MAT2BQ9NZL9 334 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 MKLN1Q9UL63 735 aa19.73■□□□□ 0.75
SGMS1-210ENST00000619438 CLDN25C9JDP6 229 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 NADKO95544 446 aaPredicted RBP19.72■□□□□ 0.75
SGMS1-210ENST00000619438 DBIP07108 87 aaKnown RBP19.72■□□□□ 0.75
SGMS1-210ENST00000619438 GUSBP08236 651 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 SLC35E2P0CK97 266 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 RGS6P49758 472 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 EXT1Q16394 746 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 WDR53Q7Z5U6 358 aaPredicted RBP19.72■□□□□ 0.75
SGMS1-210ENST00000619438 TCEANCQ8N8B7 351 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 ANKRD9Q96BM1 317 aaPredicted RBP19.72■□□□□ 0.75
SGMS1-210ENST00000619438 ZHX1-C8orf76Q96EF9 292 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 TMEM80Q96HE8 168 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 HMG20AQ9NP66 347 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 LUZP4Q9P127 313 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 MMACHCQ9Y4U1 282 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 A3GALT2U3KPV4 340 aa19.72■□□□□ 0.75
SGMS1-210ENST00000619438 BLACEA4D250 179 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 LDB3O75112 727 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 STX11O75558 287 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 DBTP11182 482 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 ZNF12P17014 697 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 NT5EP21589 574 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 GADD45AP24522 165 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 TRHRP34981 398 aaPredicted RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 OPRL1P41146 370 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 OMPP47874 163 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 CLK1P49759 484 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 HSD17B7P56937 341 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 LSM3P62310 102 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 SLC6A19Q695T7 634 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 ZNF836Q6ZNA1 936 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 KIF18BQ86Y91 864 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 ZNF595Q8IYB9 648 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 AMER2Q8N7J2 671 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 SIMC1Q8NDZ2 872 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 PIGXQ8TBF5 258 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 LMF1Q96S06 567 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 MCHR1Q99705 422 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 WDR12Q9GZL7 423 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 SLIRPQ9GZT3 109 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 MRPS18AQ9NVS2 196 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 TEKT2Q9UIF3 430 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 PMF1-BGLAPU3KQ54 211 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 SCN2AQ99250 2005 aa19.71■□□□□ 0.75
SGMS1-210ENST00000619438 CPSF4LA6NMK7 179 aaKnown RBP19.71■□□□□ 0.75
SGMS1-210ENST00000619438 A8MUA0 341 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms