RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PLEKHB1Q9UF11 243 aaPredicted RBP23.33■■□□□ 1.33
VEGFC-202ENST00000618562 TBC1D24Q9ULP9 559 aa23.33■■□□□ 1.33
VEGFC-202ENST00000618562 WDR87Q6ZQQ6 2873 aa23.33■■□□□ 1.32
VEGFC-202ENST00000618562 ZNF79Q15937 498 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 CRTC2Q53ET0 693 aaPredicted RBP23.32■■□□□ 1.32
VEGFC-202ENST00000618562 SHFQ7M4L6 423 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 RNF113BQ8IZP6 322 aaKnown RBP23.32■■□□□ 1.32
VEGFC-202ENST00000618562 PSD4Q8NDX1 1056 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 OR6C1Q96RD1 312 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 PRSS27Q9BQR3 290 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 SRRQ9GZT4 340 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 CDHR4A6H8M9 788 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 CDC42EP2O14613 210 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 FMO6PO60774 539 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 SYPP08247 313 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 GAAP10253 952 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 DAB2P98082 770 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 PLAURQ03405 335 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 NNATQ16517 81 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 OR52N1Q8NH53 320 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 AP3S1Q92572 193 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 SENP5Q96HI0 755 aaPredicted RBP23.32■■□□□ 1.32
VEGFC-202ENST00000618562 SRPK3Q9UPE1 567 aa23.32■■□□□ 1.32
VEGFC-202ENST00000618562 YARS2Q9Y2Z4 477 aaKnown RBP23.32■■□□□ 1.32
VEGFC-202ENST00000618562 TRDV1A0A1B0GX56 115 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 AKAP8O43823 692 aaKnown RBP23.31■■□□□ 1.32
VEGFC-202ENST00000618562 GUSBP08236 651 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 SDC2P34741 201 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 RHBDD2Q6NTF9 364 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 PRR23CQ6ZRP0 262 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 KLHL36Q8N4N3 616 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 ZNF321PQ8N8H1 164 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 SAMD8Q96LT4 415 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 SLC22A11Q9NSA0 550 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 CBLCQ9ULV8 474 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 PCDHGB2Q9Y5G2 931 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 A8MUA0 341 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 TIAF1O95411 115 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 PRG2P13727 222 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 TGM4P49221 684 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 COX15Q7KZN9 410 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 LHFPL3Q86UP9 236 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 GID4Q8IVV7 300 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 TMEM151BQ8IW70 566 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 PRSS58Q8IYP2 241 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 OR7G1Q8NGA0 311 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 OR4F15Q8NGB8 312 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 UBQLN3Q9H347 655 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 Q9N2J8 555 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 TOR4AQ9NXH8 423 aa23.31■■□□□ 1.32
VEGFC-202ENST00000618562 H2AFY2Q9P0M6 372 aaPredicted RBP23.31■■□□□ 1.32
VEGFC-202ENST00000618562 ZNF223Q9UK11 482 aaPredicted RBP23.31■■□□□ 1.32
VEGFC-202ENST00000618562 TCRBV16S1A1N1A0A5B0 115 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 UNC119BA6NIH7 251 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 CLEC2LP0C7M8 214 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 FABP5Q01469 135 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 DDI2Q5TDH0 399 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 SLC38A9Q8NBW4 561 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 TM9SF2Q99805 663 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 ZNF649Q9BS31 505 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 KATNB1Q9BVA0 655 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 ABCB9Q9NP78 766 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 MKKSQ9NPJ1 570 aaPredicted RBP23.3■■□□□ 1.32
VEGFC-202ENST00000618562 CTSFQ9UBX1 484 aa23.3■■□□□ 1.32
VEGFC-202ENST00000618562 GKN3PP0CG01 181 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 HTR2AP28223 471 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 SLC37A1P57057 533 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 ANGPT1Q15389 498 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 GLYR1Q49A26 553 aaPredicted RBP23.29■■□□□ 1.32
VEGFC-202ENST00000618562 PDZK1Q5T2W1 519 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 ZSCAN1Q8NBB4 408 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 IL17RDQ8NFM7 739 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 MIXL1Q9H2W2 232 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 FN3KQ9H479 309 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 EVA1AQ9H8M9 152 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 HINT3Q9NQE9 182 aaKnown RBP23.29■■□□□ 1.32
VEGFC-202ENST00000618562 SIDT1Q9NXL6 827 aaKnown RBP23.29■■□□□ 1.32
VEGFC-202ENST00000618562 PRODH2Q9UF12 536 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 CD79BP40259 229 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 OR1Q1Q15612 314 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 XKRXQ6PP77 449 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 CXXC5Q7LFL8 322 aaKnown RBP23.29■■□□□ 1.32
VEGFC-202ENST00000618562 OR52L1Q8NGH7 329 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 FANK1Q8TC84 345 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 VN1R1Q9GZP7 353 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 OR52D1Q9H346 318 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 RERGLQ9H628 205 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 NPAP1Q9NZP6 1156 aa23.29■■□□□ 1.32
VEGFC-202ENST00000618562 COL5A1P20908 1838 aaPredicted RBP23.28■■□□□ 1.32
VEGFC-202ENST00000618562 A0A1W2PQL4 384 aaPredicted RBP23.28■■□□□ 1.32
VEGFC-202ENST00000618562 IL7P13232 177 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 ZMAT1Q5H9K5 638 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 TCEAL6Q6IPX3 200 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 RPL13AP3Q6NVV1 102 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 BBS1Q8NFJ9 593 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 TMEM239Q8WW34 195 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 TCEAL3Q969E4 200 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 KIAA1143Q96AT1 154 aaPredicted RBP23.28■■□□□ 1.32
VEGFC-202ENST00000618562 CLIP3Q96DZ5 547 aa23.28■■□□□ 1.32
VEGFC-202ENST00000618562 SLC7A5P2Q9GIP4 190 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms