RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 ME2P23368 584 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 RYKP34925 604 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 APOBEC1P41238 236 aaKnown RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 KIR2DL3P43628 341 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 IDH2P48735 452 aaKnown RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 RAC3P60763 192 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 HPCAP84074 193 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 FAM27E3Q08E93 113 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 SELPLGQ14242 412 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 DAZAP2Q15038 168 aaPredicted RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 C3orf33Q6P1S2 294 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 GRINAQ7Z429 371 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 PTOV1Q86YD1 416 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 LINC01560Q8TB33 94 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 ARL5BQ96KC2 179 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 RBM24Q9BX46 236 aaKnown RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 OPN3Q9H1Y3 402 aaPredicted RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 TMEM38AQ9H6F2 299 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 CALML5Q9NZT1 146 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 OSGIN1Q9UJX0 560 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 TRIM33Q9UPN9 1127 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 ZNF443Q9Y2A4 671 aaPredicted RBP12.22□□□□□ -0.45
UPK1A-203ENST00000616789 NDUFAF1Q9Y375 327 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 CREBBPQ92793 2442 aa12.22□□□□□ -0.45
UPK1A-203ENST00000616789 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.45
UPK1A-203ENST00000616789 GKN3PP0CG01 181 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 FCGR2AP12318 317 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CCKARP32238 428 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 PEX19P40855 299 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 GZMMP51124 257 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 MERTKQ12866 999 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 TMPPEQ6ZT21 453 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 PEX5LQ8IYB4 626 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CNEP1R1Q8N9A8 125 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 ATP6V1C2Q8NEY4 427 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 ABHD3Q8WU67 409 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 C10orf82Q8WW14 230 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CPNE4Q96A23 557 aaPredicted RBP12.21□□□□□ -0.45
UPK1A-203ENST00000616789 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CGREF1Q99674 301 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CHRNA9Q9UGM1 479 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
UPK1A-203ENST00000616789 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.45
UPK1A-203ENST00000616789 MCTS1Q9ULC4 181 aaKnown RBP12.21□□□□□ -0.45
UPK1A-203ENST00000616789 CFAP73A6NFT4 308 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 GJE1A6NN92 205 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 FXYD1O00168 92 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SMAD9O15198 467 aaKnown RBP12.2□□□□□ -0.46
UPK1A-203ENST00000616789 TPST1O60507 370 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 EPXP11678 715 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 ETS2P15036 469 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 AGTR1P30556 359 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 NTF4P34130 210 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SLC1A3P43003 542 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 ARFIP2P53365 341 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 PCBP3P57721 371 aaKnown RBP12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SIRPAP78324 504 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 H3F3AP84243 136 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.46
UPK1A-203ENST00000616789 LIN52Q52LA3 116 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SYT14P1Q58G82 188 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 PDSS1Q5T2R2 415 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 ZZZ3Q8IYH5 903 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 OR6K3Q8NGY3 331 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 FAM222BQ8WU58 562 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 WFDC6Q9BQY6 131 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 SPATA9Q9BWV2 254 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 RAD21L1Q9H4I0 556 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 KAT8Q9H7Z6 458 aaKnown RBP12.2□□□□□ -0.46
UPK1A-203ENST00000616789 BCO1Q9HAY6 547 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 GLRX2Q9NS18 164 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
UPK1A-203ENST00000616789 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
UPK1A-203ENST00000616789 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 ZNF814B7Z6K7 855 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 CYTIPO60759 359 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
UPK1A-203ENST00000616789 PPIBP23284 216 aaKnown RBP12.19□□□□□ -0.46
UPK1A-203ENST00000616789 EDNRAP25101 427 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 TACR3P29371 465 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 DIO1P49895 249 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 CDK6Q00534 326 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 KLF10Q13118 480 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 GNA13Q14344 377 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 GLIPR1L2Q4G1C9 344 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 FCRLAQ7L513 359 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 NUFIP2Q7Z417 695 aaKnown RBP12.19□□□□□ -0.46
UPK1A-203ENST00000616789 NET1Q7Z628 596 aaPredicted RBP12.19□□□□□ -0.46
UPK1A-203ENST00000616789 SERPINA11Q86U17 422 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
UPK1A-203ENST00000616789 NFKBIDQ8NI38 313 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms