RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZNF35P13682 527 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ACHEP22303 614 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PDX1P52945 283 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 CRMP1Q14194 572 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ETFDHQ16134 617 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 NDUFAF7Q7L592 441 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PAQR7Q86WK9 346 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 OR6K6Q8NGW6 343 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PEX11GQ96HA9 241 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 WDR77Q9BQA1 342 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 ZCCHC4Q9H5U6 513 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 TAS2R10Q9NYW0 307 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 ENTPD4Q9Y227 616 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 LIPT1Q9Y234 373 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 TBX6O95947 436 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PCSK2P16519 638 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ZP3P21754 424 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 EDNRAP25101 427 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 PRLHRP49683 370 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 FGL1Q08830 312 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 KCNAB1Q14722 419 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ZC3H14Q6PJT7 736 aaKnown RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 IKBIPQ70UQ0 350 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 SLC16A11Q8NCK7 471 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 OR4K13Q8NH42 304 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 FIBINQ8TAL6 211 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ZNF296Q8WUU4 475 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 ATOH1Q92858 354 aaPredicted RBP12.21□□□□□ -0.45
MSH6-214ENST00000616033 POT1Q9NUX5 634 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 ATG4BQ9Y4P1 393 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 SLC22A7Q9Y694 548 aa12.21□□□□□ -0.45
MSH6-214ENST00000616033 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.46
MSH6-214ENST00000616033 STX11O75558 287 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 UBL3O95164 117 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 FABP1P07148 127 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.46
MSH6-214ENST00000616033 CCR9P51686 369 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 FZD5Q13467 585 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 TCTN1Q2MV58 587 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 HENMT1Q5T8I9 393 aaKnown RBP12.21□□□□□ -0.46
MSH6-214ENST00000616033 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 TRAM1L1Q8N609 369 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 FAM98AQ8NCA5 519 aaKnown RBP12.21□□□□□ -0.46
MSH6-214ENST00000616033 SDR9C7Q8NEX9 313 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 NUP43Q8NFH3 380 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 VN1R2Q8NFZ6 395 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 OR52N1Q8NH53 320 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 SUN3Q8TAQ9 357 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 SMPDL3BQ92485 455 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 UBE2E3Q969T4 207 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 ZNF689Q96CS4 500 aaPredicted RBP12.21□□□□□ -0.46
MSH6-214ENST00000616033 LRRC46Q96FV0 321 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 OR7D2Q96RA2 312 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 RNF208Q9H0X6 261 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 PLXNA3P51805 1871 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 SDK1Q7Z5N4 2213 aa12.21□□□□□ -0.46
MSH6-214ENST00000616033 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 G3V3Q6 166 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 LEFTY2O00292 366 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 GRM6O15303 877 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 RNGTTO60942 597 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 CTSLP07711 333 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 RAB3AP20336 220 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 CAPZA1P52907 286 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 TAS2R38P59533 333 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 SORDQ00796 357 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 HLXQ14774 488 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 C2orf68Q2NKX9 166 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 MEPCEQ7L2J0 689 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 DVL3Q92997 716 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 RGMAQ96B86 450 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 VN1R3Q9BXE9 311 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 HCFC1R1Q9NWW0 138 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ASH2LQ9UBL3 628 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ACAD8Q9UKU7 415 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 CASC3O15234 703 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 CREBL2O60519 120 aaPredicted RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 RASGRP1O95267 797 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 EFNB1P98172 346 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 PITPNAQ00169 270 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 RNLSQ5VYX0 342 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 RBMS3Q6XE24 437 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 CD180Q99467 661 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 ESRP2Q9H6T0 727 aaKnown RBP12.2□□□□□ -0.46
MSH6-214ENST00000616033 ADAP2Q9NPF8 381 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 IMPA2O14732 288 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 CERS1P27544 350 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 SGCAQ16586 387 aa12.2□□□□□ -0.46
MSH6-214ENST00000616033 C4orf46Q504U0 113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms