RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 OR2AK2Q8NG84 335 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR6K3Q8NGY3 331 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 DERL3Q96Q80 235 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC12A9Q9BXP2 914 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 PBX4Q9BYU1 374 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 FBXO44Q9H4M3 255 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 C11orf49Q9H6J7 331 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 CXorf36Q9H7Y0 433 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 RASL12Q9NYN1 266 aa9.65□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2M5A3KFT3 312 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 NAP1L6A6NFF2 107 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 LATS1O95835 1130 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 CD2P06729 351 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ACRP10323 421 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 CALCRP30988 508 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 PTH2RP49190 550 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC11A1P49279 550 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ALKBH1Q13686 389 aaKnown RBP9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 MAMSTRQ6ZN01 415 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 C11orf96Q7Z7L8 435 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF683Q8IZ20 524 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR6T1Q8NGN1 323 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR8S1Q8NH09 359 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 STOML3Q8TAV4 291 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 CA5BP1Q8WTZ4 195 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 GHSRQ92847 366 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 C3orf49Q96BT1 292 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC6A16Q9GZN6 736 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 EXO5Q9H790 373 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 MRPS30Q9NP92 439 aaKnown RBP9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SDHAF3Q9NRP4 125 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ANTXRLA6NF34 631 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZDHHC11BP0C7U3 371 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 CPN1P15169 458 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 MGMTP16455 207 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 HCCSP53701 268 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 DHODHQ02127 395 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 POU4F2Q12837 409 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 DPPA4Q7L190 304 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 FCRLAQ7L513 359 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRICKLE2Q7Z3G6 844 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC44A3Q8N4M1 653 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 DNAAF1Q8NEP3 725 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 EDARADDQ8WWZ3 215 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 TGIF2Q9GZN2 237 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 ENTPD4Q9Y227 616 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 PMS2P1A4D2B8 440 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 MEIS3P1A6NDR6 274 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 H7C0S8 307 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2A4O95047 310 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 RB1P06400 928 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 GPR143P51810 404 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 RPE65Q16518 533 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 RTP2Q5QGT7 225 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 LIN54Q6MZP7 749 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.64□□□□□ -0.873e-7■■■■□ 25.7
TNFAIP3-208ENST00000615468 C6orf120Q7Z4R8 191 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 C17orf47Q8NEP4 570 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 PIGXQ8TBF5 258 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 C4orf36Q96KX1 117 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2A7Q96R45 310 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 VRK1Q99986 396 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC25A18Q9H1K4 315 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 PDFQ9HBH1 243 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 FBXL3Q9UKT7 428 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 SPTBP11277 2137 aa9.64□□□□□ -0.87
TNFAIP3-208ENST00000615468 AGPAT2O15120 278 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 MAGEB4O15481 346 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 UQCRC2P22695 453 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 EEF1A2Q05639 463 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 MED27Q6P2C8 311 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 AGTRAPQ6RW13 159 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 POGLUT1Q8NBL1 392 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 C16orf78Q8WTQ4 265 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 S100A16Q96FQ6 103 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 RHOVQ96L33 236 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 SSX3Q99909 188 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 MEPEQ9NQ76 525 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 HINT3Q9NQE9 182 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 ABRACLQ9P1F3 81 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 A4GNTQ9UNA3 340 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 ANKRD36A6QL64 1941 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 IGLV3-10A0A075B6K4 115 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 A0A087WUU8 490 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 MEX3AA1L020 520 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2AG2A6NM03 316 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 STMND1H3BQB6 276 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 SAGP10523 405 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 EPXP11678 715 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 PBLDP30039 288 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 PTGER1P34995 402 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 FAUP35544 74 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 SPAM1P38567 509 aa9.63□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR12D2P58182 307 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms