RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 C9orf135Q5VTT2 229 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 FAM166AQ6J272 317 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 TMPPEQ6ZT21 453 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 TOR1AIP2Q8NFQ8 470 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 CCDC126Q96EE4 140 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 SORCS2Q96PQ0 1159 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 KCNS2Q9ULS6 477 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 ATP23Q9Y6H3 246 aa20.53■□□□□ 0.88
MMP28-203ENST00000612672 LOC100289279A0A1B0GTE1 492 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 TMEM233B4DJY2 109 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 H3BNH8 94 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 AZIN1O14977 448 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 EIF4E2O60573 245 aaKnown RBP20.52■□□□□ 0.88
MMP28-203ENST00000612672 PLIN3O60664 434 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 CCT3P49368 545 aaKnown RBP20.52■□□□□ 0.88
MMP28-203ENST00000612672 GZMKP49863 264 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 RPS26P62854 115 aaKnown RBP20.52■□□□□ 0.88
MMP28-203ENST00000612672 CBFBQ13951 182 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 SYT14P1Q58G82 188 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 KLHL17Q6TDP4 642 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 SSX8Q7RTT4 187 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 OR5AK3PQ8NH89 298 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 PSMA8Q8TAA3 256 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 ADAMTS15Q8TE58 950 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 APH1AQ96BI3 265 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 C3orf49Q96BT1 292 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 MTERF3Q96E29 417 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 ARL5BQ96KC2 179 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 MUS81Q96NY9 551 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 OR7D2Q96RA2 312 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 OXSMQ9NWU1 459 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 MALT1Q9UDY8 824 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 NOSIPQ9Y314 301 aaKnown RBP20.52■□□□□ 0.88
MMP28-203ENST00000612672 DNAJC15Q9Y5T4 150 aa20.52■□□□□ 0.88
MMP28-203ENST00000612672 SERINC4A6NH21 518 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 ATP6V1G2-DDX39BF2Z307 99 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 H3BQF6 201 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 SULT2B1O00204 365 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 WIPF1O43516 503 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 C6orf47O95873 294 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 CSF3P09919 207 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 NR4A2P43354 598 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 MERTKQ12866 999 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 SWI5Q1ZZU3 235 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 CFAP157Q5JU67 520 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 KANK2Q63ZY3 851 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 CCDC103Q8IW40 242 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 SDF2Q99470 211 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 TAS2R16Q9NYV7 291 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 PSMC3IPQ9P2W1 217 aaPredicted RBP20.51■□□□□ 0.87
MMP28-203ENST00000612672 DCDC2Q9UHG0 476 aa20.51■□□□□ 0.87
MMP28-203ENST00000612672 GLRA3O75311 464 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 CYP7B1O75881 506 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 PLAURQ03405 335 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 PTGR1Q14914 329 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 PDK3Q15120 406 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 RNF165Q6ZSG1 346 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 MTDHQ86UE4 582 aaKnown RBP20.5■□□□□ 0.87
MMP28-203ENST00000612672 ST8SIA1Q92185 356 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 LAT2Q9GZY6 243 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 ASB6Q9NWX5 421 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 EMC3Q9P0I2 261 aa20.5■□□□□ 0.87
MMP28-203ENST00000612672 FCMRO60667 390 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 NEFHP12036 1026 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 MAPK14Q16539 360 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 CLEC4FQ8N1N0 589 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 OR56A1Q8NGH5 318 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 FBXO17Q96EF6 278 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 CCDC106Q9BWC9 280 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 OR11A1Q9GZK7 315 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 CTPS2Q9NRF8 586 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 ACER3Q9NUN7 267 aa20.49■□□□□ 0.87
MMP28-203ENST00000612672 FAF1Q9UNN5 650 aaPredicted RBP20.49■□□□□ 0.87
MMP28-203ENST00000612672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
MMP28-203ENST00000612672 UGT2B17O75795 530 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 UBTFL6P0CB48 400 aaPredicted RBP20.48■□□□□ 0.87
MMP28-203ENST00000612672 APEHP13798 732 aaKnown RBP20.48■□□□□ 0.87
MMP28-203ENST00000612672 APOBEC3AP31941 199 aaPredicted RBP20.48■□□□□ 0.87
MMP28-203ENST00000612672 HPCAL1P37235 193 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 ASMTP46597 345 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 PDLIM4P50479 330 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 SLC16A1P53985 500 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 PHC1P78364 1004 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 GPR68Q15743 365 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 ZNF141Q15928 474 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 R3HCC1LQ7Z5L2 792 aaKnown RBP20.48■□□□□ 0.87
MMP28-203ENST00000612672 KRTCAP2Q8N6L1 136 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 ANKS4BQ8N8V4 417 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 OR5P2Q8WZ92 322 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 FOXN4Q96NZ1 517 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 GATA5Q9BWX5 397 aaPredicted RBP20.48■□□□□ 0.87
MMP28-203ENST00000612672 NMUR2Q9GZQ4 415 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 SLC17A5Q9NRA2 495 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 TMED5Q9Y3A6 229 aa20.48■□□□□ 0.87
MMP28-203ENST00000612672 DYSFO75923 2080 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 PIP5K1BO14986 540 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 CHRNGP07510 517 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 FAM153BP0C7A2 387 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 NAA20P61599 178 aa20.47■□□□□ 0.87
MMP28-203ENST00000612672 CSNK2A1P68400 391 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 477.2 ms