RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ITKQ08881 620 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 CTBP1Q13363 440 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 COTL1Q14019 142 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ZNF345Q14585 488 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 PPA1Q15181 289 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 PCBP2Q15366 365 aaKnown RBP eCLIP4.72□□□□□ -1.65
SSX9-202ENST00000608568 SHBQ15464 509 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 HMGN3Q15651 99 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ZNF239Q16600 458 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 VMACQ2NL98 169 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 FAM74A3Q4VXF1 159 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 RAB6CQ53S08 254 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR2B11Q5JQS5 317 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 AADACL4Q5VUY2 407 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 HBMQ6B0K9 141 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 CXorf57Q6NSI4 855 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ETV3LQ6ZN32 361 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 PTCHD4Q6ZW05 846 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ABHD13Q7L211 337 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 HIST3H2AQ7L7L0 130 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 KANSL1Q7Z3B3 1105 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 MRPL52Q86TS9 123 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 ANGPTL5Q86XS5 388 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 CILP2Q8IUL8 1156 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 MISPQ8IVT2 679 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 SLC30A8Q8IWU4 369 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 APCDD1Q8J025 514 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 TOMM5Q8N4H5 51 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 LINC00471Q8N535 108 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 BEST4Q8NFU0 473 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR10G2Q8NGC3 310 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR6C4Q8NGE1 309 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR8J1Q8NGP2 316 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR6X1Q8NH79 312 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 OR14A16Q8NHC5 309 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 COQ8AQ8NI60 647 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 THAP6Q8TBB0 222 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 GPBAR1Q8TDU6 330 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 XAGE5Q8WWM1 108 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 EDARADDQ8WWZ3 215 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 KCTD13Q8WZ19 329 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 DNASE2BQ8WZ79 361 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 NR4A3Q92570 626 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 HIST1H2ACQ93077 130 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 RAB24Q969Q5 203 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 NT5C3BQ969T7 300 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 EXOSC8Q96B26 276 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 RGMAQ96B86 450 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 MALSU1Q96EH3 234 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ELMOD3Q96FG2 381 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 RPL10LQ96L21 214 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 SLC6A18Q96N87 628 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 NEU1Q99519 415 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 SSX3Q99909 188 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ATF6BQ99941 703 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 GINS4Q9BRT9 223 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 AARSD1Q9BTE6 412 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 DOHHQ9BU89 302 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 CACNG6Q9BXT2 260 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 DPY30Q9C005 99 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 MS4A7Q9GZW8 240 aaPredicted RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 SPRTNQ9H040 489 aaPredicted RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 RAB6CQ9H0N0 254 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 METTL9Q9H1A3 318 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 WNT5BQ9H1J7 359 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ACTL8Q9H568 366 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ZNF768Q9H5H4 540 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 XKR8Q9H6D3 395 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 FGF20Q9NP95 211 aaPredicted RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 B3GAT2Q9NPZ5 323 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 NUDT15Q9NV35 164 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 RASL12Q9NYN1 266 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 TAS2R13Q9NYV9 303 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 TAS2R3Q9NYW6 316 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 GPR160Q9UJ42 338 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 PCTPQ9UKL6 214 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 PPIEQ9UNP9 301 aaKnown RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 CLCA2Q9UQC9 943 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 ERVK-19Q9WJR5 959 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
SSX9-202ENST00000608568 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 SEC16AO15027 2179 aa4.72□□□□□ -1.65
SSX9-202ENST00000608568 MDC1Q14676 2089 aaKnown RBP4.71□□□□□ -1.65
SSX9-202ENST00000608568 ANKRD12Q6UB98 2062 aa4.71□□□□□ -1.65
SSX9-202ENST00000608568 OR2M5A3KFT3 312 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 OR6C74A6NCV1 312 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 G3V3Q6 166 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 H0Y8X5 98 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 ADAM10O14672 748 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 MID1O15344 667 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 IRAK2O43187 625 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 GPR39O43194 453 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 ZNF749O43361 778 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 SUV39H1O43463 412 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 VEGFDO43915 354 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 ZNF217O75362 1048 aa4.71□□□□□ -1.66
SSX9-202ENST00000608568 GRAP2O75791 330 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms