RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 CCR4P51679 360 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 SELENBP1Q13228 472 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 MAD2L1Q13257 205 aaPredicted RBP18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 SMU1Q2TAY7 513 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 KLHL26Q53HC5 615 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 DCST2Q5T1A1 773 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 DNAJC14Q6Y2X3 702 aaPredicted RBP18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 LRRC34Q8IZ02 419 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 ZNF527Q8NB42 609 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 HTRA1Q92743 480 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 STACQ99469 402 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 PIGUQ9H490 435 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 AKTIPQ9H8T0 292 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 BCO1Q9HAY6 547 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 BARX1Q9HBU1 254 aaPredicted RBP18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 KLHL9Q9P2J3 617 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 GIMAP2Q9UG22 337 aa18.44■□□□□ 0.54
VIM-AS1-202ENST00000605833 GTPBP1O00178 669 aaKnown RBP18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 SMAD9O15198 467 aaKnown RBP18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 POLR3GO15318 223 aaPredicted RBP18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 H6PDO95479 791 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 FESP07332 822 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 IGHV1-2P23083 117 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 NUDT6P53370 316 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 SUMO3P55854 103 aaPredicted RBP18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 SPOCK1Q08629 439 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 RASGEF1BQ0VAM2 473 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 TP53BP2Q13625 1128 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 C6orf136Q5SQH8 315 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 C6orf52Q5T4I8 152 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 SLC43A2Q8N370 569 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 FNDC5Q8NAU1 212 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 OR7A2PQ8NGA2 310 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 FAIMQ9NVQ4 179 aa18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 NUP214P35658 2090 aaPredicted RBP18.43■□□□□ 0.54
VIM-AS1-202ENST00000605833 YLPM1P49750 1951 aaKnown RBP18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 A0A096LNT2 108 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 H3BNH8 94 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 SDHDO14521 159 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 PHF1O43189 567 aaPredicted RBP18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 BCKDHAP12694 445 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 LBPP18428 481 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 IRX1P78414 480 aaPredicted RBP18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 QPRTQ15274 297 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 TMEM158Q8WZ71 300 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 MRGPRX4Q96LA9 322 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 OR5B2Q96R09 309 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 SIKE1Q9BRV8 207 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 RHNO1Q9BSD3 238 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 CACNG6Q9BXT2 260 aa18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 QRSL1Q9H0R6 528 aaKnown RBP18.42■□□□□ 0.54
VIM-AS1-202ENST00000605833 ANK2Q01484 3957 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 FAM234BA2RU67 622 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 SCAMP2O15127 329 aaKnown RBP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 TROVE2P10155 538 aaKnown RBP eCLIP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 LAMP1P11279 417 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 COX5AP20674 150 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 HPCAL1P37235 193 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 ASMTP46597 345 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 GYS2P54840 703 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 RAC3P60763 192 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 EMX2Q04743 252 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 NRF1Q16656 503 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 EPGNQ6UW88 154 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 ADAMTS15Q8TE58 950 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 MUCL1Q96DR8 90 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 MAELQ96JY0 434 aaKnown RBP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 USB1Q9BQ65 265 aaKnown RBP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 ACTRT3Q9BYD9 372 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 WDR55Q9H6Y2 383 aaPredicted RBP18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 FGFR1OP2Q9NVK5 253 aa18.41■□□□□ 0.54
VIM-AS1-202ENST00000605833 GOLGA8QA0A0J9YX86 632 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 GOLGA8OA6NCC3 632 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 NPIPB9F8W1W9 429 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 GOLGA8NF8WBI6 632 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 CYTIPO60759 359 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 RAD51DO75771 328 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 IGHV3-9P01782 118 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 GGT1P19440 569 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 EPHA3P29320 983 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 CCT3P49368 545 aaKnown RBP18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 ATP12AP54707 1039 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 AQP5P55064 265 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 MLC1Q15049 377 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 TMEM249Q2WGJ8 235 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 SPDYE7PQ495Y7 208 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 SLC9B1Q4ZJI4 515 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 TIMM23BQ5SRD1 257 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 AGAP6Q5VW22 663 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 IL23RQ5VWK5 629 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 NXNQ6DKJ4 435 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 MAVSQ7Z434 540 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 R3HCC1LQ7Z5L2 792 aaKnown RBP18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 LSRQ86X29 649 aaPredicted RBP18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 OR5AK3PQ8NH89 298 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 MTERF3Q96E29 417 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 ZNF317Q96PQ6 595 aaPredicted RBP18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 GRIP2Q9C0E4 1043 aa18.4■□□□□ 0.54
VIM-AS1-202ENST00000605833 HOXD1Q9GZZ0 328 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms