RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 CXCR6O00574 342 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 GSTA4O15217 222 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 FMO6PO60774 539 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 LDLRP01130 860 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 OPN1SWP03999 348 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 FESP07332 822 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 GLI4P10075 376 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 IL11P20809 199 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 AGAP20933 346 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 TIMP3P35625 211 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 RGS8P57771 180 aaPredicted RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 RPS3AP61247 264 aaKnown RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 PMPCAQ10713 525 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 NRF1Q16656 503 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 CTU2Q2VPK5 515 aaKnown RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 C3orf33Q6P1S2 294 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 ADGRG3Q86Y34 549 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 MARVELD2Q8N4S9 558 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 WNT2BQ93097 391 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 CCDC120Q96HB5 630 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 ADGRG7Q96K78 797 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 KLHL15Q96M94 604 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 ZNF559Q9BR84 538 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 GMPR2Q9P2T1 348 aaKnown RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 TESQ9UGI8 421 aaKnown RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 CHRNA9Q9UGM1 479 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 OSGIN1Q9UJX0 560 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 ZNF175Q9Y473 711 aa12.49□□□□□ -0.41
RNF40-212ENST00000602784 SPIN1Q9Y657 262 aaPredicted RBP12.49□□□□□ -0.41
RNF40-212ENST00000602784 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 CLCA1A8K7I4 914 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 SEC14L5O43304 696 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 ZNF208O43345 1280 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 FRS3O43559 492 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 UBOX5O94941 541 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 GGT1P19440 569 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TACR3P29371 465 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 SMSP52788 366 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 SELENOWP63302 87 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 CYBRD1Q53TN4 286 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 RIPPLY2Q5TAB7 128 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 RANBP3LQ86VV4 465 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 OR2V1Q8NHB1 315 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 DNAJA4Q8WW22 397 aaPredicted RBP12.48□□□□□ -0.41
RNF40-212ENST00000602784 LZICQ8WZA0 190 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 SMPDL3BQ92485 455 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 FIG4Q92562 907 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 RND1Q92730 232 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 PROX1Q92786 737 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 PCDHAC1Q9H158 963 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TIGARQ9NQ88 270 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 CTPS2Q9NRF8 586 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TAS2R1Q9NYW7 299 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 CLCF1Q9UBD9 225 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 SLC9A8Q9Y2E8 581 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 PCNX1Q96RV3 2341 aa12.48□□□□□ -0.41
RNF40-212ENST00000602784 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 A0A0J9YW62 118 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 H0YC42 278 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
RNF40-212ENST00000602784 GMNNO75496 209 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 CEACAM8P31997 349 aaPredicted RBP12.47□□□□□ -0.41
RNF40-212ENST00000602784 SFTPDP35247 375 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 TPD52P55327 224 aaPredicted RBP12.47□□□□□ -0.41
RNF40-212ENST00000602784 CARD18P57730 90 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 NUP107P57740 925 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 NCALDP61601 193 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 ADORA2A-AS1P86434 159 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 HOXC5Q00444 222 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
RNF40-212ENST00000602784 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 HBMQ6B0K9 141 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 XKRXQ6PP77 449 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 C6orf89Q6UWU4 347 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 RINLQ6ZS11 566 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 CADM2Q8N3J6 435 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 OR52E4Q8NGH9 312 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 OR10D3Q8NH80 312 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms