RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
SCAF1-203ENST00000598359 FRRS1Q6ZNA5 592 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 SPATA19Q7Z5L4 167 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 VPS37AQ8NEZ2 397 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 PNPT1Q8TCS8 783 aaKnown RBP12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ROPN1LQ96C74 230 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 NEURL3Q96EH8 262 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 CCDC115Q96NT0 180 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-203ENST00000598359 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 TCF7L2Q9NQB0 619 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 PLSCR4Q9NRQ2 329 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 EXD2Q9NVH0 621 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 PAQR5Q9NXK6 330 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ELOVL5Q9NYP7 299 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 WDR45Q9Y484 360 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 GPR45Q9Y5Y3 372 aa12.28□□□□□ -0.44
SCAF1-203ENST00000598359 CCDC154A6NI56 674 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 CLDN24A6NM45 220 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 TRPC5OSA6NMA1 111 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 HMGN4O00479 90 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 KIAA0513O60268 411 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.45
SCAF1-203ENST00000598359 H6PDO95479 791 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 AK1P00568 194 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 THBDP07204 575 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 NID1P14543 1247 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 ENPP1P22413 925 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 KHKP50053 298 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 CHRNEQ04844 493 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 CBFBQ13951 182 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 FGFBP1Q14512 234 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 SYPL1Q16563 259 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 DPY19L1Q2PZI1 675 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 TIGD2Q4W5G0 525 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 GPAT3Q53EU6 434 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 COX20Q5RI15 118 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 DNAJC14Q6Y2X3 702 aaPredicted RBP12.27□□□□□ -0.45
SCAF1-203ENST00000598359 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.45
SCAF1-203ENST00000598359 RNF130Q86XS8 419 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 ANKFN1Q8N957 763 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 ZFP90Q8TF47 636 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 DNAJA3Q96EY1 480 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 MRGPRX4Q96LA9 322 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 OR52B2Q96RD2 323 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 OR52E6Q96RD3 313 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 PANX1Q96RD7 426 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
SCAF1-203ENST00000598359 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 SLC6A13Q9NSD5 602 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 MRGBPQ9NV56 204 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 BTNL2Q9UIR0 455 aa12.27□□□□□ -0.45
SCAF1-203ENST00000598359 GSC2O15499 205 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 PGRP06401 933 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 CRYGSP22914 178 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ADH6P28332 368 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 RYKP34925 604 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 SESN3P58005 492 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 PLAURQ03405 335 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 MERTKQ12866 999 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 SELENBP1Q13228 472 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 DEFB113Q30KQ7 82 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ALKBH2Q6NS38 261 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF621Q6ZSS3 439 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 EIF3MQ7L2H7 374 aaKnown RBP12.26□□□□□ -0.45
SCAF1-203ENST00000598359 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 TUSC5Q8IXB3 177 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ZBTB18Q99592 522 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF226Q9NYT6 803 aa12.26□□□□□ -0.45
SCAF1-203ENST00000598359 GJE1A6NN92 205 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 ADAM11O75078 769 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 GOSR1O95249 250 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 AGR2O95994 175 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 CHRM4P08173 479 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 CD99P14209 185 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 CD53P19397 219 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 SLC7A1P30825 629 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 PGM1P36871 562 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 PCYT1AP49585 367 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 MNAT1P51948 309 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 FOXD4Q12950 439 aaPredicted RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 SNCBQ16143 134 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 DNAL1Q4LDG9 190 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 PLEKHM3Q6ZWE6 761 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.25□□□□□ -0.45
SCAF1-203ENST00000598359 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
SCAF1-203ENST00000598359 ZNF619Q8N2I2 560 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms