RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 DNASE1P24855 282 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 DDX6P26196 483 aaKnown RBP eCLIP14.15□□□□□ -0.14
UPF1-204ENST00000596842 SLC6A1P30531 599 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 DECR1Q16698 335 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 SLC25A30Q5SVS4 291 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 MFSD12Q6NUT3 480 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 TTLQ8NG68 377 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 FGF11Q92914 225 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 PAWRQ96IZ0 340 aaKnown RBP14.15□□□□□ -0.14
UPF1-204ENST00000596842 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 GAL3ST1Q99999 423 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 FOLH1BQ9HBA9 442 aa14.15□□□□□ -0.14
UPF1-204ENST00000596842 KIAA1671Q9BY89 1806 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 PVRP15151 417 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 TMEM35AQ53FP2 167 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 TMEM31Q5JXX7 168 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 METAP1DQ6UB28 335 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 C9orf62Q8N4C0 152 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ZNF485Q8NCK3 441 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 PTP4A1Q93096 173 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 PEX11GQ96HA9 241 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ERMAPQ96PL5 475 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 OR14A2Q96R54 314 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 C1QTNF2Q9BXJ5 285 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ADAM29Q9UKF5 820 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 PLXNA2O75051 1894 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 GABRA3P34903 492 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 CREB3L2Q70SY1 520 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ZNF767PQ75MW2 155 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ANKRD33Q7Z3H0 272 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 GID4Q8IVV7 300 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 OR4K14Q8NGD5 310 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 OR5T3Q8NGG3 340 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ANGPTL6Q8NI99 470 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 OTUB2Q96DC9 234 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 SGTBQ96EQ0 304 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ARHGDIGQ99819 225 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 MS4A7Q9GZW8 240 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 MTHFD2LQ9H903 347 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 CYSLTR2Q9NS75 346 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 COPZ2Q9P299 210 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ACSL5Q9ULC5 683 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 DUXAA6NLW8 204 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 GRXCR1A8MXD5 290 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 NFATC1O95644 943 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 NUP62P37198 522 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 SWI5Q1ZZU3 235 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ZNF765Q7L2R6 523 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 ZNF527Q8NB42 609 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 CCL4L1Q8NHW4 92 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 ST8SIA4Q92187 359 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 DERL3Q96Q80 235 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 TRAF4Q9BUZ4 470 aaPredicted RBP14.14□□□□□ -0.15
UPF1-204ENST00000596842 ASB6Q9NWX5 421 aa14.14□□□□□ -0.15
UPF1-204ENST00000596842 PRUNE2Q8WUY3 3088 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 ACOD1A6NK06 481 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 STMND1H3BQB6 276 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SOX30O94993 753 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 M6PRP20645 277 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 FAM78AQ5JUQ0 283 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 PRSS41Q7RTY9 318 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 ZNF761Q86XN6 746 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 C10orf53Q8N6V4 93 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 KCNJ15Q99712 375 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 MRPS18AQ9NVS2 196 aaKnown RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 WDR87Q6ZQQ6 2873 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 TRAPPC13A5PLN9 417 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SGK494L7N484 410 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 IMPA2O14732 288 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SSX5O60225 188 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 H2AFB2P0C5Z0 115 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SLC35G6P0C7Q6 338 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 HTR2AP28223 471 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 MTNR1BP49286 362 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 OC90Q02509 493 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 RGS1Q08116 209 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 OTPQ5XKR4 325 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SLC25A25Q6KCM7 469 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 KIAA0907Q7Z7F0 614 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 BMPERQ8N8U9 685 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 ZNF680Q8NEM1 530 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 HSD17B8Q92506 261 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 COX14Q96I36 57 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 METTL17Q9H7H0 456 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 NANSQ9NR45 359 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 CLDND1Q9NY35 253 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 MED31Q9Y3C7 131 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SYT5O00445 386 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 TBX19O60806 448 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 FAM157BP0CG42 384 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 ATF1P18846 271 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 EDNRAP25101 427 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 SOX2P48431 317 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 AP2S1P53680 142 aaPredicted RBP14.13□□□□□ -0.15
UPF1-204ENST00000596842 TNK1Q13470 666 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 TMEM64Q6YI46 380 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 RNF44Q7L0R7 432 aa14.13□□□□□ -0.15
UPF1-204ENST00000596842 ZNF687Q8N1G0 1237 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms