RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TPST1O60507 370 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ADAM11O75078 769 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SERPINB7O75635 380 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 NPPAP01160 153 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 THBS1P07996 1170 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 PRG2P13727 222 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 UQCRBP14927 111 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ETS2P15036 469 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ADH6P28332 368 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SLC7A1P30825 629 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 CEACAM8P31997 349 aaPredicted RBP9.96□□□□□ -0.82
LIG1-211ENST00000596457 CPA2P48052 419 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 NUDT2P50583 147 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ZNF136P52737 540 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 CARD18P57730 90 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 COPZ1P61923 177 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SIRPAP78324 504 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 EPS8Q12929 822 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 FOXF2Q12947 444 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SELENBP1Q13228 472 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 GLIPR1L2Q4G1C9 344 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 CRYBG3Q68DQ2 2970 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ZNF550Q7Z398 422 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 PIGWQ7Z7B1 504 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SERPINA11Q86U17 422 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ARMC8Q8IUR7 673 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SMYD1Q8NB12 490 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 LILRB4Q8NHJ6 448 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
LIG1-211ENST00000596457 FNDC9Q8TBE3 224 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 RNF217Q8TC41 542 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ROBO4Q8WZ75 1007 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 WNT2BQ93097 391 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 OR5B2Q96R09 309 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 TM9SF2Q99805 663 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 MYLK2Q9H1R3 596 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 EFCAB1Q9HAE3 211 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 FAM53CQ9NYF3 392 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 SLC13A4Q9UKG4 626 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 ADAM21Q9UKJ8 722 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 GMEB1Q9Y692 573 aa9.96□□□□□ -0.82
LIG1-211ENST00000596457 TMED7-TICAM2A0A0A6YYA0 188 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CCT8L1PA6NM43 557 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 GJE1A6NN92 205 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 C19orf84I3L1E1 186 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 M0QX08 132 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 FXYD1O00168 92 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 DVL2O14641 736 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 RCBTB2O95199 551 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CTSSP25774 331 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 ELK4P28324 431 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 TACR3P29371 465 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 APOBEC1P41238 236 aaKnown RBP9.95□□□□□ -0.82
LIG1-211ENST00000596457 ACAA2P42765 397 aaKnown RBP9.95□□□□□ -0.82
LIG1-211ENST00000596457 RBBP4Q09028 425 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 VMACQ2NL98 169 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CTU2Q2VPK5 515 aaKnown RBP9.95□□□□□ -0.82
LIG1-211ENST00000596457 SLC25A53Q5H9E4 307 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 RNF220Q5VTB9 566 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 C3orf33Q6P1S2 294 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 ESPNLQ6ZVH7 1005 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 MCEMP1Q8IX19 187 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CNEP1R1Q8N9A8 125 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 OR8J3Q8NGG0 315 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CMTM5Q96DZ9 223 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 REXO5Q96IC2 774 aaKnown RBP9.95□□□□□ -0.82
LIG1-211ENST00000596457 TIGARQ9NQ88 270 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 RPS6KB2Q9UBS0 482 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 MCTS1Q9ULC4 181 aaKnown RBP9.95□□□□□ -0.82
LIG1-211ENST00000596457 CLEC4AQ9UMR7 237 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 TMED7Q9Y3B3 224 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 CHST2Q9Y4C5 530 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 HCFC1P51610 2035 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 DOCK7Q96N67 2140 aa9.95□□□□□ -0.82
LIG1-211ENST00000596457 IGHV3-15A0A0B4J1V0 119 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 TMEM72A0PK05 275 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 PRORSD1PA6NEY8 169 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 EEF1E1-BLOC1S5C9J1V9 151 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 EEF1E1O43324 174 aaKnown RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 DNAJA2O60884 412 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 DCTN3O75935 186 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 AQP8O94778 261 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 NTN1O95631 604 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 PLGP00747 810 aaPredicted RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 CXCR1P25024 350 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 PRKAR1BP31321 381 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 PCGF2P35227 344 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 SLC1A3P43003 542 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 HTR3AP46098 478 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 GZMMP51124 257 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 POLR2HP52434 150 aaKnown RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 DMTNQ08495 405 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 BNIP2Q12982 314 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 SNTB1Q13884 538 aaKnown RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 ZSWIM7Q19AV6 140 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 INTS11Q5TA45 600 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms