RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 GATSQ8NAP1 163 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 OR51L1Q8NGJ5 315 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 OR5M3Q8NGP4 307 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 C4orf36Q96KX1 117 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 ERMAPQ96PL5 475 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-222ENST00000596378 COQ7Q99807 217 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 C11orf54Q9H0W9 315 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-222ENST00000596378 OR10A5Q9H207 317 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 POLHQ9Y253 713 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 TMEM221A6NGB7 291 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 NSA2O95478 260 aaKnown RBP20.87■□□□□ 0.93
SRRM1-222ENST00000596378 CSF2P04141 144 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 PPP3R1P63098 170 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF85Q03923 595 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF141Q15928 474 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 NKAIN2Q5VXU1 208 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF517Q6ZMY9 492 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-222ENST00000596378 RTL4Q6ZR62 310 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 GDPD1Q8N9F7 314 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 OR4K13Q8NH42 304 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 SMPDL3BQ92485 455 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 SPRTNQ9H040 489 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-222ENST00000596378 TRIM36Q9NQ86 728 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 RPS6KB2Q9UBS0 482 aa20.87■□□□□ 0.93
SRRM1-222ENST00000596378 J3QLW9 94 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 CLDN4O14493 209 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 PEPDP12955 493 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF19P17023 458 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 HK1P19367 917 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 FASLGP48023 281 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 GABRA4P48169 554 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 OR12D2P58182 307 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 SLC3A1Q07837 685 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 ELOCQ15369 112 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 DEFB133Q30KQ1 61 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 LINC00114Q6XXX2 140 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 UBQLNLQ8IYU4 475 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 C17orf47Q8NEP4 570 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 OR52E2Q8NGJ4 325 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 EFHD2Q96C19 240 aaPredicted RBP20.86■□□□□ 0.93
SRRM1-222ENST00000596378 CLIP3Q96DZ5 547 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 LMAN1LQ9HAT1 526 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 CA14Q9ULX7 337 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 CHURC1-FNTBB4DL54 471 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 MAGEB4O15481 346 aaPredicted RBP20.86■□□□□ 0.93
SRRM1-222ENST00000596378 SDC3O75056 442 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 CSTAP01040 98 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 SLC6A6P31641 620 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 RBM34P42696 430 aaKnown RBP20.86■□□□□ 0.93
SRRM1-222ENST00000596378 FNTBP49356 437 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 ATP12AP54707 1039 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 BDH1Q02338 343 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 KCNAB1Q14722 419 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 COL19A1Q14993 1142 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 FAAH2Q6GMR7 532 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 ULK3Q6PHR2 472 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 OR51Q1Q8NH59 317 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 ADAM18Q9Y3Q7 739 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 GRIP1Q9Y3R0 1128 aa20.86■□□□□ 0.93
SRRM1-222ENST00000596378 MCIDASD6RGH6 385 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 HIST1H1CP16403 213 aaKnown RBP20.85■□□□□ 0.93
SRRM1-222ENST00000596378 NR4A2P43354 598 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 HTR3AP46098 478 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 ASAH1Q13510 395 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF321PQ8N8H1 164 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 OR6C4Q8NGE1 309 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 ZMYND19Q96E35 227 aaPredicted RBP20.85■□□□□ 0.93
SRRM1-222ENST00000596378 NDC1Q9BTX1 674 aa20.85■□□□□ 0.93
SRRM1-222ENST00000596378 IMPA2O14732 288 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 CCNKO75909 580 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 MT-ND5P03915 603 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 NME1P15531 152 aaKnown RBP20.84■□□□□ 0.93
SRRM1-222ENST00000596378 SHC1P29353 583 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 ACVR1BP36896 505 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF550Q7Z398 422 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 FAM98AQ8NCA5 519 aaKnown RBP20.84■□□□□ 0.93
SRRM1-222ENST00000596378 OR5J2Q8NH18 312 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 B3GAT2Q9NPZ5 323 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 RBMX2Q9Y388 322 aaKnown RBP20.84■□□□□ 0.93
SRRM1-222ENST00000596378 PLA2G10O15496 165 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 CLPSP04118 112 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 CD38P28907 300 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 SKP1P63208 163 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 IL18Q14116 193 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 RAB43Q86YS6 212 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF615Q8N8J6 731 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 TP53INP1Q96A56 240 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 G6PC3Q9BUM1 346 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 IER3IP1Q9Y5U9 82 aa20.84■□□□□ 0.93
SRRM1-222ENST00000596378 SERINC4A6NH21 518 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 FUT7Q11130 342 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.83■□□□□ 0.931e-13■■■■□ 19.3
SRRM1-222ENST00000596378 IDNKQ5T6J7 187 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 ARHGAP11AQ6P4F7 1023 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 IL20RBQ6UXL0 311 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 NCCRP1Q6ZVX7 275 aaPredicted RBP20.83■□□□□ 0.93
SRRM1-222ENST00000596378 SMAD5Q99717 465 aaKnown RBP20.83■□□□□ 0.93
SRRM1-222ENST00000596378 SLC22A4Q9H015 551 aa20.83■□□□□ 0.93
SRRM1-222ENST00000596378 CCDC86Q9H6F5 360 aaKnown RBP20.83■□□□□ 0.93
SRRM1-222ENST00000596378 PPP1R3EQ9H7J1 279 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms