RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PRAMEF27A3QJZ7 478 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 EVPLLA8MZ36 301 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 ETV2O00321 342 aaPredicted RBP15.51■□□□□ 0.07
IRF3-208ENST00000594387 NID1P14543 1247 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 SHC1P29353 583 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 CLK1P49759 484 aaKnown RBP15.51■□□□□ 0.07
IRF3-208ENST00000594387 LIN52Q52LA3 116 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 CDC20BQ86Y33 519 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 RNF128Q8TEB7 428 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 THOC1Q96FV9 657 aaKnown RBP15.51■□□□□ 0.07
IRF3-208ENST00000594387 C12orf49Q9H741 205 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 SLC6A13Q9NSD5 602 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 CHRNA9Q9UGM1 479 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 IFT52Q9Y366 437 aa15.51■□□□□ 0.07
IRF3-208ENST00000594387 FAM221AA4D161 298 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 CFAP73A6NFT4 308 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 C1QCP02747 245 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 YES1P07947 543 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 TFPTP0C1Z6 253 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 PPP3CBP16298 524 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 DNASE1P24855 282 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 UGT2B10P36537 528 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 MAP2K6P52564 334 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 GUSBP1Q15486 140 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 RGNQ15493 299 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 GTDC1Q4AE62 458 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 SYT14P1Q58G82 188 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 MRPL2Q5T653 305 aaKnown RBP15.5■□□□□ 0.07
IRF3-208ENST00000594387 TMPPEQ6ZT21 453 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 ZNF550Q7Z398 422 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 SLC38A5Q8WUX1 472 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 STON2Q8WXE9 905 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 CNOT9Q92600 299 aaKnown RBP15.5■□□□□ 0.07
IRF3-208ENST00000594387 DDIT4LQ96D03 193 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 AURKBQ96GD4 344 aaPredicted RBP15.5■□□□□ 0.07
IRF3-208ENST00000594387 SRXN1Q9BYN0 137 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 PAIP1Q9H074 479 aaKnown RBP15.5■□□□□ 0.07
IRF3-208ENST00000594387 NPHS2Q9NP85 383 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 KLHL28Q9NXS3 571 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 KLHL13Q9P2N7 655 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 DCTN4Q9UJW0 460 aa15.5■□□□□ 0.07
IRF3-208ENST00000594387 ANKHD1Q8IWZ3 2542 aaKnown RBP15.5■□□□□ 0.07
IRF3-208ENST00000594387 CLDN24A6NM45 220 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 EDF1O60869 148 aaKnown RBP15.49■□□□□ 0.07
IRF3-208ENST00000594387 SASH3O75995 380 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 TROVE2P10155 538 aaKnown RBP eCLIP15.49■□□□□ 0.071e-6■□□□□ 8.4
IRF3-208ENST00000594387 CCNA2P20248 432 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 AGTR1P30556 359 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 DIO1P49895 249 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 POLR2HP52434 150 aaKnown RBP15.49■□□□□ 0.07
IRF3-208ENST00000594387 RASGEF1BQ0VAM2 473 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 TUSC5Q8IXB3 177 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 ABHD3Q8WU67 409 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 NINJ1Q92982 152 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 TMEM19Q96HH6 336 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 WFIKKN1Q96NZ8 548 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 CCDC106Q9BWC9 280 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 COQ10BQ9H8M1 238 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 MRGBPQ9NV56 204 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.49■□□□□ 0.07
IRF3-208ENST00000594387 HDGFL3Q9Y3E1 203 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 TESMINQ9Y4I5 508 aa15.49■□□□□ 0.07
IRF3-208ENST00000594387 FREM1Q5H8C1 2179 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 TMED7-TICAM2A0A0A6YYA0 188 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 A0A0G2JND7 137 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 A0A1W2PP18 115 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 FAAHO00519 579 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 ANGPT2O15123 496 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 THBS1P07996 1170 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 RPS4Y1P22090 263 aaKnown RBP15.48■□□□□ 0.07
IRF3-208ENST00000594387 CXCR1P25024 350 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 DNAJA1P31689 397 aaKnown RBP15.48■□□□□ 0.07
IRF3-208ENST00000594387 SLC1A3P43003 542 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 MVDP53602 400 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 ZNF311Q5JNZ3 666 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 LRIF1Q5T3J3 769 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 PRAMEF8Q5VWM4 474 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 PRAMEF7Q5VXH5 474 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 VRK2Q86Y07 508 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 KRT73Q86Y46 540 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 FUNDC1Q8IVP5 155 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 BBS10Q8TAM1 723 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 ZC3HAV1LQ96H79 300 aaKnown RBP15.48■□□□□ 0.07
IRF3-208ENST00000594387 SPATA5L1Q9BVQ7 753 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 HDHD5Q9BXW7 423 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 EMC3Q9P0I2 261 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 LEF1Q9UJU2 399 aaPredicted RBP15.48■□□□□ 0.07
IRF3-208ENST00000594387 GPR52Q9Y2T5 361 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 NDUFAF1Q9Y375 327 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 TMED7Q9Y3B3 224 aa15.48■□□□□ 0.07
IRF3-208ENST00000594387 IGHV3-15A0A0B4J1V0 119 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 CDHR4A6H8M9 788 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 DNPH1O43598 174 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 PMS2P2O95744 297 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 TACR3P29371 465 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 EPS8Q12929 822 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 POU4F3Q15319 338 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 GCNT6Q5T4J0 391 aa15.47■□□□□ 0.07
IRF3-208ENST00000594387 METTL21CQ5VZV1 264 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms