RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 MXD1Q05195 221 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 KLHL26Q53HC5 615 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 AGAP7PQ5VUJ5 663 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 VASNQ6EMK4 673 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 B3GLCTQ6Y288 498 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 RTL4Q6ZR62 310 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 D2HGDHQ8N465 521 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 OR4C6Q8NH72 309 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 NACC2Q96BF6 587 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 SENP5Q96HI0 755 aaPredicted RBP18.09■□□□□ 0.49
CLIP3-206ENST00000593074 TNFRSF13CQ96RJ3 184 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 GSTK1Q9Y2Q3 226 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 EML5Q05BV3 1969 aa18.09■□□□□ 0.49
CLIP3-206ENST00000593074 A0A087WUJ7 227 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 C12orf71A8MTZ7 269 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 PPP1R3DO95685 299 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 ZNF3P17036 446 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 SDC2P34741 201 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 TGM4P49221 684 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 HNRNPA0Q13151 305 aaKnown RBP18.08■□□□□ 0.49
CLIP3-206ENST00000593074 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 ARHGAP11AQ6P4F7 1023 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 ZNF440Q8IYI8 595 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 TMEM99Q8N816 258 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 SYT14Q8NB59 555 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 DNAJA4Q8WW22 397 aaPredicted RBP18.08■□□□□ 0.49
CLIP3-206ENST00000593074 TPK1Q9H3S4 243 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 RERGLQ9H628 205 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 CPNE5Q9HCH3 593 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 INPP5EQ9NRR6 644 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 SEMA5BQ9P283 1151 aa18.08■□□□□ 0.49
CLIP3-206ENST00000593074 PLEKHB1Q9UF11 243 aaPredicted RBP18.08■□□□□ 0.49
CLIP3-206ENST00000593074 A8MU76 341 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 POLR1CO15160 346 aaPredicted RBP18.08■□□□□ 0.48
CLIP3-206ENST00000593074 RGS5O15539 181 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 PTTG1O95997 202 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 OR1D4P47884 311 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 FNDC7Q5VTL7 733 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 TMPRSS11AQ6ZMR5 421 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 GATAD2AQ86YP4 633 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 LAX1Q8IWV1 398 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 GPR135Q8IZ08 494 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 OR1L3Q8NH93 324 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 LMF1Q96S06 567 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 TEAD3Q99594 435 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 TIMP4Q99727 224 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 KATNB1Q9BVA0 655 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 MKKSQ9NPJ1 570 aaPredicted RBP18.08■□□□□ 0.48
CLIP3-206ENST00000593074 ASB6Q9NWX5 421 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 ICAM5Q9UMF0 924 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 V9GYH0 126 aa18.08■□□□□ 0.48
CLIP3-206ENST00000593074 MN1Q10571 1320 aaPredicted RBP18.08■□□□□ 0.48
CLIP3-206ENST00000593074 BOLA2-SMG1P6H3BVE0 249 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CLEC2LP0C7M8 214 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 HK1P19367 917 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CELP19835 753 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 NOS3P29474 1203 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CSF2RBP32927 897 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ADH7P40394 386 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CRMP1Q14194 572 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 KLHL12Q53G59 568 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 WDR74Q6RFH5 385 aaPredicted RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF321PQ8N8H1 164 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ATP6V1C2Q8NEY4 427 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 EFHD2Q96C19 240 aaPredicted RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 SLC41A2Q96JW4 573 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 SLC46A1Q96NT5 459 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ALG8Q9BVK2 526 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 PNO1Q9NRX1 252 aaKnown RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 SERTAD3Q9UJW9 196 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CMAHPQ9Y471 501 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 SYNDIG1LA6NDD5 238 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 HLA-DPB1P04440 258 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 FOLR1P15328 257 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 GALP22466 123 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 PPICP45877 212 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 GPR50Q13585 617 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 FCRLBQ6BAA4 426 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 PRSS42Q7Z5A4 293 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 KMT5CQ86Y97 462 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 KLBQ86Z14 1044 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 SLITRK4Q8IW52 837 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 POC5Q8NA72 575 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 C3orf49Q96BT1 292 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 LRFN5Q96NI6 719 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 DCLRE1CQ96SD1 692 aaKnown RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 NDC1Q9BTX1 674 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 HOXD1Q9GZZ0 328 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ISG20L2Q9H9L3 353 aaKnown RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 HAO2Q9NYQ3 351 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 DHCR7Q9UBM7 475 aaKnown RBP18.07■□□□□ 0.48
CLIP3-206ENST00000593074 CHRNA9Q9UGM1 479 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF229Q9UJW7 825 aa18.07■□□□□ 0.48
CLIP3-206ENST00000593074 NUP210LQ5VU65 1888 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 COL5A1P20908 1838 aaPredicted RBP18.06■□□□□ 0.48
CLIP3-206ENST00000593074 IL33O95760 270 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 IFNGP01579 166 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 IGKV3-11P04433 115 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 GALEQ14376 348 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms