RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 TFPIP10646 304 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 IL7RP16871 459 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 DNASE1P24855 282 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 MRPL19P49406 292 aaKnown RBP13.54□□□□□ -0.24
ERCC1-213ENST00000592023 RAC3P60763 192 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 GNA13Q14344 377 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 NUFIP2Q7Z417 695 aaKnown RBP13.54□□□□□ -0.24
ERCC1-213ENST00000592023 GRINAQ7Z429 371 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 TUSC5Q8IXB3 177 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 CMIPQ8IY22 773 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 PEX5LQ8IYB4 626 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 SLC25A43Q8WUT9 341 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-213ENST00000592023 GTF2H4Q92759 462 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 THOC1Q96FV9 657 aaKnown RBP13.54□□□□□ -0.24
ERCC1-213ENST00000592023 CCDC28BQ9BUN5 200 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 CCDC106Q9BWC9 280 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 PAIP1Q9H074 479 aaKnown RBP13.54□□□□□ -0.24
ERCC1-213ENST00000592023 CCDC167Q9P0B6 97 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 CHRNA9Q9UGM1 479 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
ERCC1-213ENST00000592023 DEFB108AA8MXU0 73 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 PRKD3O94806 890 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 DBIP07108 87 aaKnown RBP13.53□□□□□ -0.24
ERCC1-213ENST00000592023 FESP07332 822 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CCNA2P20248 432 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CRYGSP22914 178 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 APOBEC1P41238 236 aaKnown RBP13.53□□□□□ -0.24
ERCC1-213ENST00000592023 MAGEA8P43361 318 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 IDH2P48735 452 aaKnown RBP13.53□□□□□ -0.24
ERCC1-213ENST00000592023 DIO1P49895 249 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CRISP3P54108 245 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 TFAP2EQ6VUC0 442 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 STAC2Q6ZMT1 411 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 ZNF836Q6ZNA1 936 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 VRK2Q86Y07 508 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 FUNDC1Q8IVP5 155 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 OR52P1PQ8NH57 321 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CKAP2Q8WWK9 683 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 PIK3IP1Q96FE7 263 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 PSD2Q9BQI7 771 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 OR11A1Q9GZK7 315 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 PLEKHF2Q9H8W4 249 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 MTHFD2LQ9H903 347 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CALML5Q9NZT1 146 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 KLHL9Q9P2J3 617 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 CCDC168Q8NDH2 2452 aa13.53□□□□□ -0.24
ERCC1-213ENST00000592023 A0A096LPI6 279 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 TMEM247A6NEH6 219 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 SULT2B1O00204 365 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 RAF1P04049 648 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 NUDT7P0C024 238 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 TFPTP0C1Z6 253 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 CD1EP15812 388 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 HOXB9P17482 250 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-213ENST00000592023 CSNK2A1P68400 391 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-213ENST00000592023 RASGEF1BQ0VAM2 473 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 KEAP1Q14145 624 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 BLOC1S3Q6QNY0 202 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 SPNS3Q6ZMD2 512 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 TMPPEQ6ZT21 453 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 C22orf34Q6ZV56 151 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 SLC38A5Q8WUX1 472 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 SPDL1Q96EA4 605 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 ARL5BQ96KC2 179 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 MAGEB18Q96M61 343 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-213ENST00000592023 CACYBPQ9HB71 228 aaKnown RBP13.52□□□□□ -0.25
ERCC1-213ENST00000592023 GP6Q9HCN6 339 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 FANCFQ9NPI8 374 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 EDARQ9UNE0 448 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-213ENST00000592023 AKAP9Q99996 3911 aa13.52□□□□□ -0.25
ERCC1-213ENST00000592023 CFAP73A6NFT4 308 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 CLIC1O00299 241 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 CYTIPO60759 359 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 ATE1O95260 518 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 YES1P07947 543 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 UQCRBP14927 111 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 TACR3P29371 465 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 POLR2HP52434 150 aaKnown RBP13.51□□□□□ -0.25
ERCC1-213ENST00000592023 EPS8Q12929 822 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 SQLEQ14534 574 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 RGNQ15493 299 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 TSC22D1Q15714 1073 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 AGKQ53H12 422 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 ABLIM2Q6H8Q1 611 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.51□□□□□ -0.25
ERCC1-213ENST00000592023 CXorf67Q86X51 503 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-213ENST00000592023 PMM1Q92871 262 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 MAL2Q969L2 176 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 HS3ST6Q96QI5 342 aa13.51□□□□□ -0.25
ERCC1-213ENST00000592023 FOXC2Q99958 501 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms