RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CR2P20023 1033 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 S100PP25815 95 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.15
CIRBP-228ENST00000590347 PGDP52209 483 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 TAF13Q15543 124 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 RTP2Q5QGT7 225 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 SLC29A4Q7RTT9 530 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 C11orf96Q7Z7L8 435 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 SNX33Q8WV41 574 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 SMIM4Q8WVI0 70 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 GHSRQ92847 366 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 FGF11Q92914 225 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 VOPP1Q96AW1 172 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 ZC3H10Q96K80 434 aaKnown RBP14.08□□□□□ -0.15
CIRBP-228ENST00000590347 SLITRK2Q9H156 845 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 GKN1Q9NS71 199 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 RASL12Q9NYN1 266 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 PTPRDP23468 1912 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 CXorf65A6NEN9 183 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ADAM12O43184 909 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 B4GALT2O60909 372 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 RHOCP08134 193 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 RPL17P18621 184 aaKnown RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 RHOAP61586 193 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 RNLSQ5VYX0 342 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 GLT8D1Q68CQ7 371 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF626Q68DY1 528 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 CDC73Q6P1J9 531 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF783Q6ZMS7 281 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 LRRC70Q7Z2Q7 622 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ARL14Q8N4G2 192 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 EIF4E3Q8N5X7 224 aaKnown RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 TAS2R10Q9NYW0 307 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 GREB1Q4ZG55 1949 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 RAB5BP61020 215 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 DEFA6Q01524 100 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 TP53I3Q53FA7 332 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 NUDT18Q6ZVK8 323 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 C12orf40Q86WS4 652 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 TMEM173Q86WV6 379 aaPredicted RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 WDSUB1Q8N9V3 476 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 OR10R2Q8NGX6 335 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 C1orf216Q8TAB5 229 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 PNPLA2Q96AD5 504 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 OR14A2Q96R54 314 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 CLCC1Q96S66 551 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 GPR62Q9BZJ7 368 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 TMEM38AQ9H6F2 299 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ISYNA1Q9NPH2 558 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 SDHAF3Q9NRP4 125 aa14.08□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF629Q9UEG4 869 aaPredicted RBP14.08□□□□□ -0.16
CIRBP-228ENST00000590347 PATJQ8NI35 1801 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 LOC100509620A0A075B734 347 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 UBE2QL1A1L167 161 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 PRAMEF27A3QJZ7 478 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 C1orf196B1AJZ1 125 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 OIP5O43482 229 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 PPIAP62937 165 aaKnown RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 B4GALNT1Q00973 533 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 DHODHQ02127 395 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 POU4F2Q12837 409 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 CNTN1Q12860 1018 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 KRBOX4Q5JUW0 171 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 MRPL10Q7Z7H8 261 aaKnown RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 SLC9B2Q86UD5 537 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 ZG16BQ96DA0 208 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 CAPNS2Q96L46 248 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 SAMD8Q96LT4 415 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF354BQ96LW1 612 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 PDCD1LG2Q9BQ51 273 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 C20orf24Q9BUV8 137 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 ASB6Q9NWX5 421 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 DCAF16Q9NXF7 216 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 FBXO4Q9UKT5 387 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 IGLV3-10A0A075B6K4 115 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 OR2A4O95047 310 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 F11P03951 625 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 NR2F1P10589 423 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 ZNF44P15621 663 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 SLC6A12P48065 614 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 DLX5P56178 289 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 PLA2G7Q13093 441 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 TSSK4Q6SA08 328 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 SLC25A38Q96DW6 304 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 OR2A7Q96R45 310 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 TIMP4Q99727 224 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 CHMP1AQ9HD42 196 aaPredicted RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
CIRBP-228ENST00000590347 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
CIRBP-228ENST00000590347 ACOD1A6NK06 481 aa14.06□□□□□ -0.16
CIRBP-228ENST00000590347 WASH3PC4AMC7 463 aa14.06□□□□□ -0.16
CIRBP-228ENST00000590347 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
CIRBP-228ENST00000590347 GPR37L1O60883 481 aa14.06□□□□□ -0.16
CIRBP-228ENST00000590347 FURINP09958 794 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms