RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 BEND4Q6ZU67 534 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 VPS33AQ96AX1 596 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 ITCHQ96J02 903 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 ALPK1Q96QP1 1244 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 PSD2Q9BQI7 771 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 EBF4Q9BQW3 602 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 CCDC106Q9BWC9 280 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 RMND5AQ9H871 391 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 TCF7L2Q9NQB0 619 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 SERINC1Q9NRX5 453 aa13.4□□□□□ -0.26
NFIX-212ENST00000590027 ZNF469Q96JG9 3925 aaPredicted RBP13.4□□□□□ -0.26
NFIX-212ENST00000590027 RAI1Q7Z5J4 1906 aaPredicted RBP13.4□□□□□ -0.26
NFIX-212ENST00000590027 FAM234BA2RU67 622 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 PRKD3O94806 890 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 BCHEP06276 602 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 THBDP07204 575 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 FESP07332 822 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 ZCCHC18P0CG32 403 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 DIO1P49895 249 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 DSTNP60981 165 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 STX1BP61266 288 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 GRINAQ7Z429 371 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 CMIPQ8IY22 773 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 SLC43A2Q8N370 569 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 MBD6Q96DN6 1003 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 DNAJA3Q96EY1 480 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 ZNF300Q96RE9 604 aaPredicted RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 ACTR6Q9GZN1 396 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 TPT1P8Q9HAU6 139 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 FANCFQ9NPI8 374 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 KLHL9Q9P2J3 617 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 P2RX2Q9UBL9 471 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 CHRNA9Q9UGM1 479 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 ING1Q9UK53 422 aaPredicted RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 SPIN1Q9Y657 262 aaPredicted RBP13.39□□□□□ -0.27
NFIX-212ENST00000590027 PRR14LQ5THK1 2151 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 DSPPQ9NZW4 1301 aa13.39□□□□□ -0.27
NFIX-212ENST00000590027 CYTIPO60759 359 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 GCM2O75603 506 aaPredicted RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 TFPIP10646 304 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 PPP3CBP16298 524 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 CD53P19397 219 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 PSMB1P20618 241 aaKnown RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 APOBEC1P41238 236 aaKnown RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 CRATP43155 626 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 MRPL19P49406 292 aaKnown RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 IDH3AP50213 366 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 RPS26P11Q5JNZ5 115 aaPredicted RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 ABLIM2Q6H8Q1 611 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 SLC2A7Q6PXP3 512 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 ZNF836Q6ZNA1 936 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 TMPPEQ6ZT21 453 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 CXorf67Q86X51 503 aaPredicted RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 TACO1Q9BSH4 297 aaKnown RBP13.38□□□□□ -0.27
NFIX-212ENST00000590027 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 BCO1Q9HAY6 547 aa13.38□□□□□ -0.27
NFIX-212ENST00000590027 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 SULT2B1O00204 365 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 TGDSO95455 350 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 DBIP07108 87 aaKnown RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 YES1P07947 543 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 IL7RP16871 459 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 HOXB9P17482 250 aaPredicted RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 MAGEA8P43361 318 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 IDH2P48735 452 aaKnown RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 CRISP3P54108 245 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 CSNK2A1P68400 391 aaPredicted RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 RASGEF1BQ0VAM2 473 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 EPS8Q12929 822 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 GNA13Q14344 377 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 TSC22D1Q15714 1073 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 VRK2Q86Y07 508 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 WFDC8Q8IUA0 241 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 TMEM19Q96HH6 336 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 ARL5BQ96KC2 179 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 CCDC28BQ9BUN5 200 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 PAIP1Q9H074 479 aaKnown RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
NFIX-212ENST00000590027 UBTD1Q9HAC8 227 aa13.37□□□□□ -0.27
NFIX-212ENST00000590027 VPS13CQ709C8 3753 aa13.36□□□□□ -0.27
NFIX-212ENST00000590027 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
NFIX-212ENST00000590027 TMEM72A0PK05 275 aa13.36□□□□□ -0.27
NFIX-212ENST00000590027 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
NFIX-212ENST00000590027 NR5A2O00482 541 aa13.36□□□□□ -0.27
NFIX-212ENST00000590027 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms