RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RP9Q8TA86 221 aaKnown RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 CMTM5Q96DZ9 223 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 LRRC46Q96FV0 321 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 AURKBQ96GD4 344 aaPredicted RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 PINK1Q9BXM7 581 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 PAIP1Q9H074 479 aaKnown RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 THUMPD1Q9NXG2 353 aaKnown RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 CALML5Q9NZT1 146 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 ZNF629Q9UEG4 869 aaPredicted RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 KCNE5Q9UJ90 142 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 ICAM5Q9UMF0 924 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 L3MBTL1Q9Y468 752 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 HCFC1P51610 2035 aa9.33□□□□□ -0.92
SDF2-208ENST00000589788 INTS1Q8N201 2190 aaKnown RBP9.33□□□□□ -0.92
SDF2-208ENST00000589788 CENPVL1A0A0U1RR11 272 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 H0YC42 278 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CLIC1O00299 241 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 RCBTB2O95199 551 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 OPN1LWP04000 364 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CHRM4P08173 479 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 LINGO3P0C6S8 592 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 COX4I1P13073 169 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CAPN3P20807 821 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 ELK4P28324 431 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 NOS3P29474 1203 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 ZNF136P52737 540 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 TPD52P55327 224 aaPredicted RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 CLDN15P56746 228 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 EEF1A1P68104 462 aaKnown RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 KCNJ10P78508 379 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 FOXF1Q12946 379 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 SKP2Q13309 424 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CYLC2Q14093 348 aaPredicted RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 GNA13Q14344 377 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 FGFBP1Q14512 234 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 QPRTQ15274 297 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 MAPK14Q16539 360 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 ZSCAN26Q16670 478 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 PDSS1Q5T2R2 415 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 EEF1A1P5Q5VTE0 462 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 PPP4R4Q6NUP7 873 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 PLXDC2Q6UX71 529 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 LRRC74BQ6ZQY2 392 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 HMGN2P46Q86SG4 172 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 SNX32Q86XE0 403 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 PEX5LQ8IYB4 626 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 GPR119Q8TDV5 335 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 INTS12Q96CB8 462 aaKnown RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 ARSGQ96EG1 525 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 NPAS1Q99742 590 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 KLHDC3Q9BQ90 382 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 THUMPD3Q9BV44 507 aaKnown RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 SLC38A1Q9H2H9 487 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 TMEM185BQ9H7F4 350 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 MTHFD2LQ9H903 347 aaPredicted RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 CACYBPQ9HB71 228 aaKnown RBP9.32□□□□□ -0.92
SDF2-208ENST00000589788 SLC52A3Q9NQ40 469 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 ARL8BQ9NVJ2 186 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 TAGLN3Q9UI15 199 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 ZNF175Q9Y473 711 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 CACNA1DQ01668 2161 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 MED12LQ86YW9 2145 aa9.32□□□□□ -0.92
SDF2-208ENST00000589788 UNC79Q9P2D8 2635 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 A0A1W2PP18 115 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 AGAP5A6NIR3 686 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 GJE1A6NN92 205 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 BBIP1A8MTZ0 92 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 EEF1E1-BLOC1S5C9J1V9 151 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ANGPT2O15123 496 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 EEF1E1O43324 174 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 TGM6O95932 706 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 IL18BPO95998 194 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 BCHEP06276 602 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 DBIP07108 87 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 T-ENOLP0DO92 83 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FCGR2AP12318 317 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CD1EP15812 388 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PRKCAP17252 672 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PGCP20142 388 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CALB2P22676 271 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PPIBP23284 216 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 PSMA4P25789 261 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 UQCRC1P31930 480 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 ASCL1P50553 236 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 AGFG1P52594 562 aaKnown RBP9.31□□□□□ -0.92
SDF2-208ENST00000589788 MVDP53602 400 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 CRISP3P54108 245 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TFF3Q07654 80 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 BNIP1Q12981 228 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 FADDQ13158 208 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 PON3Q15166 354 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 RGNQ15493 299 aa9.31□□□□□ -0.92
SDF2-208ENST00000589788 TOMM34Q15785 309 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 356.2 ms