RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 GABRA3P34903 492 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 MAP3K8P41279 467 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 RABIFP47224 123 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 GPR143P51810 404 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 GBX2P52951 348 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 SF3B4Q15427 424 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 ISXQ2M1V0 245 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 EOGTQ5NDL2 527 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF57Q68EA5 555 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 SHFQ7M4L6 423 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 GATAD2AQ86YP4 633 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 SYS1Q8N2H4 156 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 SLC37A3Q8NCC5 494 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 OR10H4Q8NGA5 316 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 UBASH3BQ8TF42 649 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 RFT1Q96AA3 541 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 NACC2Q96BF6 587 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 KCNJ15Q99712 375 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 PELOQ9BRX2 385 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 LMF2Q9BU23 707 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 MRI1Q9BV20 369 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 MMP28Q9H239 520 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 IL21RQ9HBE5 538 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 STMN3Q9NZ72 180 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 PTTG3PQ9NZH4 202 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 AKAP7Q9P0M2 348 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 EXTL2Q9UBQ6 330 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 SIGLEC7Q9Y286 467 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 RALGAPA1Q6GYQ0 2036 aa12.98□□□□□ -0.33
NEDD4L-223ENST00000588516 CD8B2A6NJW9 211 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 CDC42EP2O14613 210 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 SNAPC5O75971 98 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 SBK2P0C263 348 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 OR2T7P0C7T2 308 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 CD8BP10966 210 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 PSKH1P11801 424 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 PRG2P13727 222 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 POLR2CP19387 275 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 APEX1P27695 318 aaKnown RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 NOS3P29474 1203 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 PTGER1P34995 402 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 PITPNBP48739 271 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 HOXC5Q00444 222 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 IFITM2Q01629 132 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 PRICKLE4Q2TBC4 344 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 KLHL12Q53G59 568 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 TRMT12Q53H54 448 aaKnown RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 SLC35D3Q5M8T2 416 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 ULK3Q6PHR2 472 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 TMEM91Q6ZNR0 172 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 VASH1Q7L8A9 365 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 RD3Q7Z3Z2 195 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 OAFQ86UD1 273 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 SIRT6Q8N6T7 355 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 CSNK1A1LQ8N752 337 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 LSMEM1Q8N8F7 131 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 ABHD4Q8TB40 342 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 CTHRC1Q96CG8 243 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 C8orf33Q9H7E9 229 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 POLMQ9NP87 494 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF275Q9NSD4 429 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 MAT2BQ9NZL9 334 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 SERTAD3Q9UJW9 196 aa12.97□□□□□ -0.33
NEDD4L-223ENST00000588516 ARPC4-TTLL3A0A0A6YYG9 625 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 A0A0B4J2E0 115 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 A0A1B0GX12 115 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 A0A1W2PS29 197 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 POM121BA6NF01 834 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 EFCAB7A8K855 629 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 CYR61O00622 381 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 PDCD5O14737 125 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 LRRTM2O43300 516 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 SSX4O60224 188 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 GPRIN2O60269 458 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 CTSVO60911 334 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 NDUFB2O95178 105 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 LYPD3O95274 346 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 LALBAP00709 142 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 IGF2P01344 180 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 C1QBP02746 253 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 ZGLP1P0C6A0 271 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 MAKP20794 623 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 TBXA2RP21731 343 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 ALAS2P22557 587 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 HTR2AP28223 471 aa12.96□□□□□ -0.33
NEDD4L-223ENST00000588516 SOX18P35713 384 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms