RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 FPR3P25089 353 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 PRKAR1BP31321 381 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 STAT5AP42229 794 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 CDH11P55287 796 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 VSX2P58304 361 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 CHRNEQ04844 493 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 ACSM1Q08AH1 577 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 GRM7Q14831 915 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 ZNF750Q32MQ0 723 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 PRAMEF17Q5VTA0 474 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 AADACL4Q5VUY2 407 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 C6orf15Q6UXA7 325 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 TIPARPQ7Z3E1 657 aaKnown RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 VRK2Q86Y07 508 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 OSTF1Q92882 214 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 NKD1Q969G9 470 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 RERGQ96A58 199 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 CLIP3Q96DZ5 547 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 SARGQ9BW04 601 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 GIMAP4Q9NUV9 329 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 MED17Q9NVC6 651 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 CNIH4Q9P003 139 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 ZMIZ1Q9ULJ6 1067 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
CCDC43-203ENST00000588210 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-203ENST00000588210 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 LOC102723532A0A0G2JNH3 316 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 LINC00854A0A1B0GVQ3 168 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 FITM1A5D6W6 292 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CPSF4LA6NMK7 179 aaKnown RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CENPXA8MT69 81 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 H0YGG7 62 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SURF4O15260 269 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 STATHP02808 62 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CTSBP07858 339 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CCNYL3P0C7X3 344 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CERS1P27544 350 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 IFNA8P32881 189 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CD79BP40259 229 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ARF3P61204 181 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CLN3Q13286 438 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 DECR1Q16698 335 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 PYDC2Q56P42 97 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 LCN1P1Q5VSP4 162 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 YOD1Q5VVQ6 348 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 METAP1DQ6UB28 335 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SHFQ7M4L6 423 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ZNF655Q8N720 491 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ARIH2OSQ8N7S6 290 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 NUP43Q8NFH3 380 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 OR4Q3Q8NH05 313 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ACOT11Q8WXI4 607 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SLC7A6Q92536 515 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SOSTQ9BQB4 213 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 PRR14Q9BWN1 585 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 RERGLQ9H628 205 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ZNF232Q9UNY5 417 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CHST2Q9Y4C5 530 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CELSR3Q9NYQ7 3312 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 A0A087WV48 116 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 LRRTM2O43300 516 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 KLF4O43474 513 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 FRS3O43559 492 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 IGHA1P01876 353 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 KLK3P07288 261 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 MYL9P24844 172 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 PTBP1P26599 531 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 MC3RP41968 323 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TGM3Q08188 693 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 MAP4K2Q12851 820 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 DSG2Q14126 1118 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TGIF1Q15583 401 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 C18orf63Q68DL7 685 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TYW3Q6IPR3 259 aaKnown RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 RHBDD2Q6NTF9 364 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 IL22RA1Q8N6P7 574 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SLC38A9Q8NBW4 561 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 SRFBP1Q8NEF9 429 aaKnown RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ELP4Q96EB1 424 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 MACROD1Q9BQ69 325 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 NDC1Q9BTX1 674 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 JAM3Q9BX67 310 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TEX12Q9BXU0 123 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 PADI1Q9ULC6 663 aa13.48□□□□□ -0.25
CCDC43-203ENST00000588210 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
CCDC43-203ENST00000588210 CHD8Q9HCK8 2581 aa13.47□□□□□ -0.25
CCDC43-203ENST00000588210 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.47□□□□□ -0.25
CCDC43-203ENST00000588210 TEX51A0A1B0GUA7 166 aa13.47□□□□□ -0.25
CCDC43-203ENST00000588210 A0A1W2PS29 197 aa13.47□□□□□ -0.25
CCDC43-203ENST00000588210 TTC36A6NLP5 189 aa13.47□□□□□ -0.25
CCDC43-203ENST00000588210 CASKO14936 926 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms