RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PDZK1Q5T2W1 519 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 C11orf71Q6IPW1 123 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 BHLHB9Q6PI77 547 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 MTDHQ86UE4 582 aaKnown RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 ELOA3Q8NG57 546 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 TMEM234Q8WY98 164 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 QRSL1Q9H0R6 528 aaKnown RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 EML4Q9HC35 981 aaKnown RBP12.39□□□□□ -0.43
DNMT1-213ENST00000587604 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 GIMAP2Q9UG22 337 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
DNMT1-213ENST00000587604 CFLARO15519 480 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-213ENST00000587604 NPHS1O60500 1241 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 RAD51DO75771 328 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 AK1P00568 194 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 DHRS4L1P0CG22 281 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 CD40P25942 277 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 VLDLRP98155 873 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 MERTKQ12866 999 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 GPR68Q15743 365 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 ATP6AP1LQ52LC2 224 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 XKR7Q5GH72 579 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 C6orf136Q5SQH8 315 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 KLHL17Q6TDP4 642 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 C4orf33Q8N1A6 199 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 MUC15Q8N387 334 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 SLC25A43Q8WUT9 341 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-213ENST00000587604 APH1AQ96BI3 265 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 BHLHE41Q9C0J9 482 aaPredicted RBP12.38□□□□□ -0.43
DNMT1-213ENST00000587604 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 TMEM160Q9NX00 188 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 KCNE5Q9UJ90 142 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
DNMT1-213ENST00000587604 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
DNMT1-213ENST00000587604 CIB4A0PJX0 185 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 CCT8L1PA6NM43 557 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 FCMRO60667 390 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 STX11O75558 287 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 CYP7B1O75881 506 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 SLU7O95391 586 aaKnown RBP12.37□□□□□ -0.43
DNMT1-213ENST00000587604 CSTAP01040 98 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 IGHV3-9P01782 118 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 SLC25A16P16260 332 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 PGCP20142 388 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 MATN1P21941 496 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 APOBEC1P41238 236 aaKnown RBP12.37□□□□□ -0.43
DNMT1-213ENST00000587604 FABP6P51161 128 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF83P51522 516 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 HBA1P69905 142 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 CHRNEQ04844 493 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 IL23RQ5VWK5 629 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 EIF3MQ7L2H7 374 aaKnown RBP12.37□□□□□ -0.43
DNMT1-213ENST00000587604 RIMKLAQ8IXN7 391 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 KRTCAP2Q8N6L1 136 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 MUS81Q96NY9 551 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 C1orf50Q9BV19 199 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 BEX2Q9BXY8 128 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 ASB6Q9NWX5 421 aa12.37□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF716A6NP11 495 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 H7C417 338 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 GPR171O14626 319 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 UGT2B17O75795 530 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 PMS2P2O95744 297 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 UBTFL6P0CB48 400 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 TFPIP10646 304 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 FKBP2P26885 142 aaKnown RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 NTF4P34130 210 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 RPS26P62854 115 aaKnown RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 ARHGAP11BQ3KRB8 267 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 C6orf120Q7Z4R8 191 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 ZNF525Q8N782 197 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 AGR3Q8TD06 166 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 UBLCP1Q8WVY7 318 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-213ENST00000587604 FAM168AQ92567 244 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 ZHX1-C8orf76Q96EF9 292 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 C3orf30Q96M34 536 aa12.36□□□□□ -0.43
DNMT1-213ENST00000587604 INPP5KQ9BT40 448 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms