RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC43A2Q8N370 569 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 TMEM234Q8WY98 164 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 ST8SIA1Q92185 356 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 PAIP2Q9BPZ3 127 aaKnown RBP9.9□□□□□ -0.82
CCDC47-206ENST00000584112 NUF2Q9BZD4 464 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 C20orf27Q9GZN8 174 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF350Q9GZX5 532 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 LAT2Q9GZY6 243 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 OR51I1Q9H343 314 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 SERHL2Q9H4I8 314 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 C12orf49Q9H741 205 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 MEAF6Q9HAF1 191 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 GPR52Q9Y2T5 361 aa9.9□□□□□ -0.82
CCDC47-206ENST00000584112 YLPM1P49750 1951 aaKnown RBP9.9□□□□□ -0.83
CCDC47-206ENST00000584112 ETV2O00321 342 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ANKRD28O15084 1053 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 EFNA2O43921 213 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 GPRIN2O60269 458 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SCN2BO60939 215 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 UGT2B17O75795 530 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 CYP7B1O75881 506 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 PRKD3O94806 890 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SRD5A1P18405 259 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 PSMB1P20618 241 aaKnown RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SHC1P29353 583 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 S100A3P33764 101 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 CHI3L1P36222 383 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ANXA11P50995 505 aaKnown RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 RAC3P60763 192 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 HPCAP84074 193 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 LRRC74AQ0VAA2 488 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 BST1Q10588 318 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SKP2Q13309 424 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 CASP8Q14790 479 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 QPRTQ15274 297 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 TOMM34Q15785 309 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ACKR1Q16570 336 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SAXO2Q658L1 398 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ANKRD34AQ69YU3 496 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 EIF3MQ7L2H7 374 aaKnown RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SPATA19Q7Z5L4 167 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ANKRD46Q86W74 232 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 CLEC4FQ8N1N0 589 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 TRIML2Q8N7C3 387 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ATP6V1C2Q8NEY4 427 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 STEAP2Q8NFT2 490 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ABHD3Q8WU67 409 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 XAGE5Q8WWM1 108 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 NEURL3Q96EH8 262 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 MARK4Q96L34 752 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 HDHD5Q9BXW7 423 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SRXN1Q9BYN0 137 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 ACTR6Q9GZN1 396 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 COQ10BQ9H8M1 238 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SERINC1Q9NRX5 453 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 KLHL9Q9P2J3 617 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 KLHL13Q9P2N7 655 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 MARCOQ9UEW3 520 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-206ENST00000584112 MKLN1Q9UL63 735 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 SLC35A3Q9Y2D2 325 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 WDR45Q9Y484 360 aa9.89□□□□□ -0.83
CCDC47-206ENST00000584112 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 TRPC5OSA6NMA1 111 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 ESPNB1AK53 854 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 KIAA0513O60268 411 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 FCMRO60667 390 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 DNAJA2O60884 412 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 YES1P07947 543 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 UBTFL6P0CB48 400 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 OR12D1P0DN82 309 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 PHC1P78364 1004 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 TXNL4AP83876 142 aaKnown RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 MPP2Q14168 576 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 CLEC12BQ2HXU8 276 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 TIGD2Q4W5G0 525 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 SPANXN4Q5MJ08 99 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 TNFAIP8L2Q6P589 184 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF619Q8N2I2 560 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 SLC25A43Q8WUT9 341 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 ROPN1LQ96C74 230 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 OR5B2Q96R09 309 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 SLC35A5Q9BS91 424 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 THUMPD3Q9BV44 507 aaKnown RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 SHARPINQ9H0F6 387 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 ACER3Q9NUN7 267 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 PNPOQ9NVS9 261 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 AIG1Q9NVV5 245 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 THAP1Q9NVV9 213 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 BTNL2Q9UIR0 455 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 KCNE5Q9UJ90 142 aa9.88□□□□□ -0.83
CCDC47-206ENST00000584112 SPIN1Q9Y657 262 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-206ENST00000584112 TMEM120BA0PK00 339 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 SLCO1B7G3V0H7 640 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 SDHDO14521 159 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms