RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SLC25A52Q3SY17 297 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 EOGTQ5NDL2 527 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 PMF1Q6P1K2 205 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 GDPD3Q7L5L3 318 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ARCQ7LC44 396 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 LCA5Q86VQ0 697 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC35F2Q8IXU6 374 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC38A6Q8IZM9 456 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SVOPLQ8N434 492 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 MAIP1Q8WWC4 291 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 HTR3CQ8WXA8 447 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF606Q8WXB4 792 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 PIGCQ92535 297 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 NEIL2Q969S2 332 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 EFHD2Q96C19 240 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 HAVCR1Q96D42 359 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC41A3Q96GZ6 507 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 MS4A14Q96JA4 679 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 B3GALT6Q96L58 329 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 RPRD1AQ96P16 312 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 EDEM2Q9BV94 578 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SPATA16Q9BXB7 569 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SRXN1Q9BYN0 137 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 RAB34Q9BZG1 259 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 VCX2Q9H322 139 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 LRRN3Q9H3W5 708 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF702PQ9H963 129 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 FANCFQ9NPI8 374 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 SIGLEC8Q9NYZ4 499 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 Q9UF83 564 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 ANGPTL2Q9UKU9 493 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 CLEC4EQ9ULY5 219 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 COPS3Q9UNS2 423 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 MOKQ9UQ07 419 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 IKBKGQ9Y6K9 419 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 AGRNO00468 2067 aa2.73□□□□□ -1.97
SMCHD1-209ENST00000583441 GON4LQ3T8J9 2241 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TRAV26-1A0A087WT03 109 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 LRP5LA4QPB2 252 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 EPOPA6NHQ4 379 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TRDCB7Z8K6 153 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 MPHOSPH10O00566 681 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 CXCL11O14625 94 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 PRRG1O14668 218 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF208O43345 1280 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 SLITRK3O94933 977 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 P0C879 139 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 CCDC130P13994 396 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 POU2F1P14859 743 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 COX5AP20674 150 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 RPL13AP40429 203 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 LEPP41159 167 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 MAP3K8P41279 467 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ASPHQ12797 758 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ELAVL3Q14576 367 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ARL6IP1Q15041 203 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC15A2Q16348 729 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TRIM16LQ309B1 348 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF677Q86XU0 584 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 VSTM4Q8IW00 320 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 UBQLNLQ8IYU4 475 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF679Q8IYX0 411 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 LRRC75A-AS1Q8N1F1 130 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZCCHC7Q8N3Z6 543 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 OR4D9Q8NGE8 314 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC25A38Q96DW6 304 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 MAGEB18Q96M61 343 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 NOL4LQ96MY1 436 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 IL4I1Q96RQ9 567 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZBTB18Q99592 522 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF184Q99676 751 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TMEM43Q9BTV4 400 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 CHIAQ9BZP6 476 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 PTGES2Q9H7Z7 377 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 IL36GQ9NZH8 169 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TMEM9Q9P0T7 183 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 ONECUT1Q9UBC0 465 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 KANK1Q14678 1352 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 PNPLA6Q8IY17 1366 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 TNRQ92752 1358 aa2.72□□□□□ -1.97
SMCHD1-209ENST00000583441 HELTA6NFD8 242 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 A8MU10 97 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 POLR2DO15514 142 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 RIPK2O43353 540 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 OR10H3O60404 316 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 PALMO75781 387 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 AP2A1O95782 977 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 CAPN1P07384 714 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 TNFRSF17Q02223 184 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 CUL1Q13616 776 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 KYAT1Q16773 422 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 CEP55Q53EZ4 464 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 TP53I3Q53FA7 332 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 SFT2D3Q587I9 215 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 TPGS2Q68CL5 300 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 TRPM8Q7Z2W7 1104 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 HSD17B13Q7Z5P4 300 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 TMEM123Q8N131 208 aa2.71□□□□□ -1.98
SMCHD1-209ENST00000583441 C14orf178Q8N769 122 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms