RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HINT3Q9NQE9 182 aaKnown RBP20.8■□□□□ 0.92
CCDC47-204ENST00000582252 CMC2Q9NRP2 79 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 SEC16AO15027 2179 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 A0A087WUJ7 227 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 A0A1W2PQM1 296 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 METTL15A6NJ78 407 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 ADAM11O75078 769 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 PTP4A3O75365 173 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 TSPAN19P0C672 248 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 TGFBR1P36897 503 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 NBL1P41271 181 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 FXYD6P3P58550 94 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 RAB15P59190 212 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 WBP2NLQ6ICG8 309 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 CPOQ8IVL8 374 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF321PQ8N8H1 164 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 ADIPOR1Q96A54 375 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 SGTBQ96EQ0 304 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 JAM3Q9BX67 310 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 SLC19A3Q9BZV2 496 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 TGIF2Q9GZN2 237 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 OCEL1Q9H607 264 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 MKL2Q9ULH7 1088 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 SSR3Q9UNL2 185 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 PMF1-BGLAPU3KQ54 211 aa20.79■□□□□ 0.92
CCDC47-204ENST00000582252 RIIAD1A6NNX1 92 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 UTS2O95399 124 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 IFNGP01579 166 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 GP1BAP07359 652 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 CPEP16870 476 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 IL12BP29460 328 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SOX3P41225 446 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 ARHGAP11AQ6P4F7 1023 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 PAQR6Q6TCH4 344 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 LAPTM4BQ86VI4 370 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 FNDC8Q8TC99 324 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 PHOSPHO1Q8TCT1 267 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 OTULINQ96BN8 352 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 LRFN5Q96NI6 719 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 GAL3ST4Q96RP7 486 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 VN1R1Q9GZP7 353 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SIAEQ9HAT2 523 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 EXOSC4Q9NPD3 245 aaKnown RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 ATXN7L1Q9ULK2 861 aaPredicted RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 ICAM5Q9UMF0 924 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 RIF1Q5UIP0 2472 aaKnown RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 PRR23D1E9PI22 279 aaPredicted RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 GTPBP1O00178 669 aaKnown RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SLC2A10O95528 541 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 PRR23D2P0DMB1 279 aaPredicted RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 PNMTP11086 282 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF3P17036 446 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 HK1P19367 917 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 ACP1P24666 158 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SLC1A3P43003 542 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 FOXK2Q01167 660 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 EBPQ15125 230 aaKnown RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 FNDC7Q5VTL7 733 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 MEPCEQ7L2J0 689 aaKnown RBP20.78■□□□□ 0.92
CCDC47-204ENST00000582252 KLHL36Q8N4N3 616 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 OR1N1Q8NGS0 311 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 NUDT9Q9BW91 350 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SYNDIG1Q9H7V2 258 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 TNFRSF10DQ9UBN6 386 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 CARD8Q9Y2G2 431 aa20.78■□□□□ 0.92
CCDC47-204ENST00000582252 SLC22A31A6NKX4 558 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 TO15178 435 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF264O43296 627 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 RFPL3O75679 317 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 IGHA1P01876 353 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 CD59P13987 128 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF12P17014 697 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 FUT1P19526 365 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 SLC6A8P48029 635 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 NIPAL3Q6P499 406 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 PLBD1Q6P4A8 553 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 PHC2Q8IXK0 858 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 OR51A7Q8NH64 312 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 UFD1Q92890 307 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 HSPBAP1Q96EW2 488 aa20.77■□□□□ 0.92
CCDC47-204ENST00000582252 NXF2Q9GZY0 626 aaKnown RBP20.77■□□□□ 0.92
CCDC47-204ENST00000582252 TRAV27A0A087WT01 109 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 IGF2P01344 180 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 S100A5P33763 92 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 RPS3AP61247 264 aaKnown RBP20.76■□□□□ 0.91
CCDC47-204ENST00000582252 NDUFAF6Q330K2 333 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 ZNF574Q6ZN55 896 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-204ENST00000582252 NAXDQ8IW45 347 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 OR52N1Q8NH53 320 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 GFM1Q96RP9 751 aaKnown RBP20.76■□□□□ 0.91
CCDC47-204ENST00000582252 RXFP3Q9NSD7 469 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 RARRES3Q9UL19 164 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 SPIN1Q9Y657 262 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-204ENST00000582252 PCNX2A6NKB5 2137 aa20.76■□□□□ 0.91
CCDC47-204ENST00000582252 ELOA3DA6NLF2 546 aaPredicted RBP20.75■□□□□ 0.91
CCDC47-204ENST00000582252 J3QRK9 145 aa20.75■□□□□ 0.91
CCDC47-204ENST00000582252 SOCS6O14544 535 aa20.75■□□□□ 0.91
CCDC47-204ENST00000582252 REM1O75628 298 aa20.75■□□□□ 0.91
CCDC47-204ENST00000582252 GPX5O75715 221 aa20.75■□□□□ 0.91
CCDC47-204ENST00000582252 NDUFB2O95178 105 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms