RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FNDC9Q8TBE3 224 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 C3orf49Q96BT1 292 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 DGAT2Q96PD7 388 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 KRT12Q99456 494 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 NDNQ99608 321 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 NTMT1Q9BV86 223 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 NAT10Q9H0A0 1025 aaKnown RBP5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 CHODLQ9H9P2 273 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 EML4Q9HC35 981 aaKnown RBP5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 LYRM4Q9HD34 91 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 ARL15Q9NXU5 204 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 BFARQ9NZS9 450 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 FBXL2Q9UKC9 423 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 BAG5Q9UL15 447 aa5.59□□□□□ -1.51
PPP4R1-216ENST00000580283 IQANK1A0A1B0GTG1 560 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 C2orf92A0A1B0GVN3 265 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 A0A1W2PP18 115 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 CTAGE9A4FU28 777 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 SYNDIG1LA6NDD5 238 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 FAM90A8PA6NJQ4 464 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 SLC22A20A6NK97 555 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 SHISA9B4DS77 424 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 UBFD1O14562 309 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 TCF21O43680 179 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 CBR3O75828 277 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 AQP8O94778 261 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 FAM90A13PP0C7W8 464 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 FAM90A24PP0C7X0 464 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 ABCD3P28288 659 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 HTR6P50406 440 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 P2RX3P56373 397 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 GALNT1Q10472 559 aaPredicted RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 BLMHQ13867 455 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 TSC22D1Q15714 1073 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 OR5M10Q6IEU7 315 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 OR2A2Q6IF42 318 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 C11orf71Q6IPW1 123 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 TMIGD1Q6UXZ0 262 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 IGFN1Q86VF2 1251 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 RFLNBQ8N5W9 214 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 KBTBD8Q8NFY9 601 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 OR14L1PQ8NHC6 308 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 C10orf105Q8TEF2 133 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 C1orf54Q8WWF1 131 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 CCT6BQ92526 530 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 LINGO1Q96FE5 620 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 RBM18Q96H35 190 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 HBEGFQ99075 208 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 RBM38Q9H0Z9 239 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 NXF5Q9H1B4 397 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 NT5DC2Q9H857 520 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 SPAG4Q9NPE6 437 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 TAS2R10Q9NYW0 307 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 NDUFAF4Q9P032 175 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 ARMCX1Q9P291 453 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 MRPS18CQ9Y3D5 142 aaKnown RBP5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 RNF115Q9Y4L5 304 aa5.58□□□□□ -1.52
PPP4R1-216ENST00000580283 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 TMEM89A2RUT3 159 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 OR6C76A6NM76 312 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CDC7O00311 574 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 PFDN6O15212 129 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CLOCKO15516 846 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 UGT2B11O75310 529 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SH3BGRLO75368 114 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 LY6HO94772 140 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SCELO95171 688 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 FTCDO95954 541 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CSTBP04080 98 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 HIST1H2AGP0C0S8 130 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 COX7A2P14406 83 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 HIST1H2ADP20671 130 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 IL11P20809 199 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CPN2P22792 545 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 TCEA1P23193 301 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CDKN2AP42771 156 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SLC6A8P48029 635 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 GAS1P54826 345 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 HNRNPH2P55795 449 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 AP1S2P56377 157 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 CLDN20P56880 219 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 BSPH1Q075Z2 132 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SNX1Q13596 522 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 DHX34Q14147 1143 aaKnown RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SQLEQ14534 574 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 BCL2A1Q16548 175 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 KBTBD12Q3ZCT8 623 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 FAM166AQ6J272 317 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 SLC30A6Q6NXT4 461 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 P4HA3Q7Z4N8 544 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 IFNEQ86WN2 208 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 UBQLNLQ8IYU4 475 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 ST13P4Q8IZP2 240 aaPredicted RBP5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 TAGAPQ8N103 731 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 RNF175Q8N4F7 328 aa5.57□□□□□ -1.52
PPP4R1-216ENST00000580283 VPS37AQ8NEZ2 397 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms