RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TMEM255BQ8WV15 326 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 CEP19Q96LK0 163 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 GPA33Q99795 319 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 SLC30A2Q9BRI3 323 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 DNAJB12Q9NXW2 375 aaKnown RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 GPN3Q9UHW5 284 aaPredicted RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 COL27A1Q8IZC6 1860 aaPredicted RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 OTOGLQ3ZCN5 2332 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 ADRA2AP08913 450 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 DRD5P21918 477 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 OCLNQ16625 522 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMG8-203ENST00000578922 MRPL14Q6P1L8 145 aaKnown RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 C16orf47Q6ZP98 133 aaPredicted RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 PRICKLE2Q7Z3G6 844 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 LINC00471Q8N535 108 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 C7orf57Q8NEG2 295 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 SETD6Q8TBK2 473 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 GRHL3Q8TE85 626 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 MND1Q9BWT6 205 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 POLR2J3Q9H1A7 115 aaKnown RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 MOV10Q9HCE1 1003 aaKnown RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 PARD6AQ9NPB6 346 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.59■□□□□ 0.57
SMG8-203ENST00000578922 FAM86C1Q9NVL1 165 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 NPAP1Q9NZP6 1156 aa18.59■□□□□ 0.57
SMG8-203ENST00000578922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.58■□□□□ 0.57
SMG8-203ENST00000578922 REM1O75628 298 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 RFPL3O75679 317 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 GPX5O75715 221 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 OR5F1O95221 314 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 ONECUT2O95948 504 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 GPR143P51810 404 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 ALDH6A1Q02252 535 aaKnown RBP18.58■□□□□ 0.57
SMG8-203ENST00000578922 FGFBP1Q14512 234 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 SPHARQ15513 63 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 PAPD4Q6PIY7 484 aaKnown RBP18.58■□□□□ 0.57
SMG8-203ENST00000578922 RRM2BQ7LG56 351 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 SLC35B4Q969S0 331 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 HHATLQ9HCP6 504 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 CNIH4Q9P003 139 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 PISDQ9UG56 409 aa18.58■□□□□ 0.57
SMG8-203ENST00000578922 ZNF223Q9UK11 482 aaPredicted RBP18.58■□□□□ 0.57
SMG8-203ENST00000578922 H3BN98 237 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 PIP5K1CO60331 668 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 IL33O95760 270 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 HPGDP15428 266 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 PSMA1P25786 263 aaKnown RBP18.58■□□□□ 0.56
SMG8-203ENST00000578922 COX10Q12887 443 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 CCBE1Q6UXH8 406 aaPredicted RBP18.58■□□□□ 0.56
SMG8-203ENST00000578922 GDPD3Q7L5L3 318 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 PROKR2Q8NFJ6 384 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 NR4A3Q92570 626 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 IL4I1Q96RQ9 567 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 SLC26A1Q9H2B4 701 aa18.58■□□□□ 0.56
SMG8-203ENST00000578922 SERINC4A6NH21 518 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 UTS2O95399 124 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 CSTAP01040 98 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 GUSBP08236 651 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 COPZ1P61923 177 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 TCF15Q12870 199 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 SLC25A30Q5SVS4 291 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 CD300LDQ6UXZ3 194 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 RAB11FIP2Q7L804 512 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 APCDD1LQ8NCL9 501 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 TMCO6Q96DC7 493 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 FAM46AQ96IP4 442 aaKnown RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 ASPNQ9BXN1 380 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 STRADBQ9C0K7 418 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 NCDNQ9UBB6 729 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 TRAPPC13A5PLN9 417 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 SPNP16150 400 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 PCYT1AP49585 367 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 PSMD4P55036 377 aaKnown RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 PLCXD2Q0VAA5 305 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 ISXQ2M1V0 245 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 DCAF12Q5T6F0 453 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 DHRS13Q6UX07 377 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 WDR88Q6ZMY6 472 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 CPEB2Q7Z5Q1 589 aaKnown RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 NFAM1Q8NET5 270 aaPredicted RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 OR9Q1Q8NGQ5 310 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 WDR77Q9BQA1 342 aaPredicted RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 SMURF1Q9HCE7 757 aa18.57■□□□□ 0.56
SMG8-203ENST00000578922 TESQ9UGI8 421 aaKnown RBP18.57■□□□□ 0.56
SMG8-203ENST00000578922 B4E171 279 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 ICOSLGO75144 302 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 IL12BP29460 328 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 TSPAN7P41732 249 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 RORCP51449 518 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 DCAF7P61962 342 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 RNF4P78317 190 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 MLLT11Q13015 90 aaPredicted RBP18.56■□□□□ 0.56
SMG8-203ENST00000578922 C1DQ13901 141 aaKnown RBP18.56■□□□□ 0.56
SMG8-203ENST00000578922 CD226Q15762 336 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 KLHL26Q53HC5 615 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 FAM198BQ6UWH4 519 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 APOOLQ6UXV4 268 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 NRMQ8IXM6 262 aa18.56■□□□□ 0.56
SMG8-203ENST00000578922 SLC34A3Q8N130 599 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms