RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 EFNA2O43921 213 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 TNFSF13O75888 250 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 PGM3O95394 542 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 YES1P07947 543 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 NUDT7P0C024 238 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 GKN3PP0CG01 181 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 EPXP11678 715 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 POU2F1P14859 743 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 CAPN3P20807 821 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 PSMA4P25789 261 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 TACR3P29371 465 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 AQP1P29972 269 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SLC1A3P43003 542 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 KIR2DL2P43627 348 aaPredicted RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 POLR2HP52434 150 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 OR2B6P58173 313 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 RAC3P60763 192 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 CDK6Q00534 326 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 FAM27E3Q08E93 113 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 CAPRIN1Q14444 709 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 MAPRE2Q15555 327 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 FBXL19-AS1Q494R0 122 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SYT14P1Q58G82 188 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SLC25A53Q5H9E4 307 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 MRPL2Q5T653 305 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 VWA1Q6PCB0 445 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 PLEKHM3Q6ZWE6 761 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 FCRLAQ7L513 359 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF550Q7Z398 422 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 GRINAQ7Z429 371 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 DHDDSQ86SQ9 333 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF100Q8IYN0 542 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SLC43A2Q8N370 569 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 NFKBIDQ8NI38 313 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 BBS10Q8TAM1 723 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SLC26A7Q8TE54 656 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF775Q96BV0 537 aaPredicted RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 DDIT4LQ96D03 193 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 DNAJA3Q96EY1 480 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 LURAP1Q96LR2 239 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SH3GL1Q99961 368 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 MED18Q9BUE0 208 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 POLDIP3Q9BY77 421 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 FAM107BQ9H098 131 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 A4GALTQ9NPC4 353 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 EXOSC3Q9NQT5 275 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 CTPS2Q9NRF8 586 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 KLHL28Q9NXS3 571 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 DNAJB12Q9NXW2 375 aaKnown RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 GALNT8Q9NY28 637 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ELOVL5Q9NYP7 299 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF226Q9NYT6 803 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 SELENONQ9NZV5 590 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 VAPAQ9P0L0 249 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 CHRNA9Q9UGM1 479 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ITGB1BP2Q9UKP3 347 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF443Q9Y2A4 671 aaPredicted RBP5.87□□□□□ -1.47
TRAF4-213ENST00000578917 TMED7Q9Y3B3 224 aa5.87□□□□□ -1.47
TRAF4-213ENST00000578917 EML6Q6ZMW3 1958 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 IGHV3-15A0A0B4J1V0 119 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 SH3D21A4FU49 640 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CDHR4A6H8M9 788 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CCDC22O60826 627 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 BCAS1O75363 584 aaPredicted RBP5.86□□□□□ -1.47
TRAF4-213ENST00000578917 NTN1O95631 604 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 THBS1P07996 1170 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CD8BP10966 210 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ETS2P15036 469 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 IGFBP2P18065 325 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 SHC1P29353 583 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CD79BP40259 229 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CLK1P49759 484 aaKnown RBP5.86□□□□□ -1.47
TRAF4-213ENST00000578917 DIO1P49895 249 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 MVDP53602 400 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 NCALDP61601 193 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 SORDQ00796 357 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 RASGEF1BQ0VAM2 473 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 SCARB2Q14108 478 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF239Q16600 458 aaKnown RBP5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CTU2Q2VPK5 515 aaKnown RBP5.86□□□□□ -1.47
TRAF4-213ENST00000578917 RUNDC3AQ59EK9 446 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 LRIF1Q5T3J3 769 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 PRAMEF8Q5VWM4 474 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 PRAMEF7Q5VXH5 474 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 AP1ARQ63HQ0 302 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ANKRD34AQ69YU3 496 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 WBP2NLQ6ICG8 309 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 DLEU7Q6UYE1 221 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF836Q6ZNA1 936 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 TMPPEQ6ZT21 453 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 BEND4Q6ZU67 534 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CPLX4Q7Z7G2 160 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 MTDHQ86UE4 582 aaKnown RBP5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ADGRG3Q86Y34 549 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 ARMC8Q8IUR7 673 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 TUSC5Q8IXB3 177 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 UBE2J2Q8N2K1 259 aa5.86□□□□□ -1.47
TRAF4-213ENST00000578917 CLIP4Q8N3C7 705 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms