RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 GRINAQ7Z429 371 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 DHRSXQ8N5I4 330 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 OR1J4Q8NGS1 313 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 SLC7A13Q8TCU3 470 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 GNPDA2Q8TDQ7 276 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 ZNF597Q96LX8 424 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 C5orf34Q96MH7 638 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 SIGLEC12Q96PQ1 595 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 UBL7Q96S82 380 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 SH2D2AQ9NP31 389 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 PAPOLBQ9NRJ5 636 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 VNN3Q9NY84 501 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 RAB26Q9ULW5 256 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 CSAG2Q9Y5P2 127 aa12.68□□□□□ -0.38
CSNK1D-209ENST00000578904 TRAV17A0A0B4J275 112 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 TRBV4-1A0A0J9YWV2 114 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SEMA7AO75326 666 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SLC25A12O75746 678 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 NEURL1O76050 574 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 CD46P15529 392 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 CNR1P21554 472 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 PRKACGP22612 351 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 CXCR1P25024 350 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 EIF1P41567 113 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 TNFSF10P50591 281 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 POLR2HP52434 150 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 AQP4P55087 323 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 FOXD4Q12950 439 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 LY6DQ14210 128 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 NDUFAF6Q330K2 333 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SPINK14Q6IE38 97 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 FAHD1Q6P587 224 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 CBLN3Q6UW01 205 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 MBOAT2Q6ZWT7 520 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 PLCZ1Q86YW0 608 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 RBMXL3Q8N7X1 1067 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 AQP11Q8NBQ7 271 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 PSD4Q8NDX1 1056 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 GPR119Q8TDV5 335 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 WBP1Q96G27 269 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 FEVQ99581 238 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SLC29A1Q99808 456 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 PRR14Q9BWN1 585 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 DGCR6LQ9BY27 220 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SLC25A18Q9H1K4 315 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 GALNT9Q9HCQ5 603 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 BOKQ9UMX3 212 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-209ENST00000578904 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 A0A087WUJ7 227 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 A0A087WUU8 490 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 H0YAE9 185 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 KLRC4-KLRK1H3BQV0 150 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 SNPHO15079 494 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 BCAS1O75363 584 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 CBR3O75828 277 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 CCL3P10147 92 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 PTGDSP41222 190 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 APOBEC1P41238 236 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 PLAURQ03405 335 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 ZNF169Q14929 603 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 QPRTQ15274 297 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.382e-6■□□□□ 10.7
CSNK1D-209ENST00000578904 ZNF766Q5HY98 468 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 C1orf94Q6P1W5 598 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 TBPL2Q6SJ96 375 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 PCSK4Q6UW60 755 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 MDGA2Q7Z553 956 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 MRGPRX4Q96LA9 322 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 FAM173AQ9BQD7 235 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 FUZQ9BT04 418 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 TMEM43Q9BTV4 400 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 TEX12Q9BXU0 123 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 UCK2Q9BZX2 261 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 NDEL1Q9GZM8 345 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 DSN1Q9H410 356 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 KLHL1Q9NR64 748 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 MAN2C1Q9NTJ4 1040 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 MED11Q9P086 117 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 B4GALT7Q9UBV7 327 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 NTNG1Q9Y2I2 539 aa12.66□□□□□ -0.38
CSNK1D-209ENST00000578904 LRRC42Q9Y546 428 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms