RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 C5orf34Q96MH7 638 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 DSN1Q9H410 356 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 CTPS2Q9NRF8 586 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
SS18-206ENST00000577572 KRT84Q9NSB2 600 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 MED17Q9NVC6 651 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 TMEFF2Q9UIK5 374 aaPredicted RBP13.89□□□□□ -0.19
SS18-206ENST00000577572 NTNG1Q9Y2I2 539 aa13.89□□□□□ -0.19
SS18-206ENST00000577572 SPIN1Q9Y657 262 aaPredicted RBP13.89□□□□□ -0.19
SS18-206ENST00000577572 A0A087WV48 116 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 A6NL46 340 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 KLRC4-KLRK1H3BQV0 150 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ZNF208O43345 1280 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 NME2P1O60361 137 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 SP1P08047 785 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ACADSP16219 412 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ZNF17P17021 662 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 NME2P22392 152 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 PRKACGP22612 351 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 CXCR1P25024 350 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 MST1P26927 711 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 TACR3P29371 465 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 OMPP47874 163 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
SS18-206ENST00000577572 AQP4P55087 323 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ESRRGP62508 458 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ARG2P78540 354 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ALDH6A1Q02252 535 aaKnown RBP13.88□□□□□ -0.19
SS18-206ENST00000577572 MERTKQ12866 999 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
SS18-206ENST00000577572 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 HYAL4Q2M3T9 481 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.88□□□□□ -0.19
SS18-206ENST00000577572 ANKDD1AQ495B1 522 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 CMPK2Q5EBM0 449 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 NHSL2Q5HYW2 709 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 PRAMEF20Q5VT98 475 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 TTC23Q5W5X9 447 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ZER1Q7Z7L7 766 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 CLDN22Q8N7P3 220 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 STK35Q8TDR2 534 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 SCMH1Q96GD3 660 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
SS18-206ENST00000577572 GABARAPL3Q9BY60 117 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 ZFP64Q9NPA5 681 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 SERINC1Q9NRX5 453 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 MED11Q9P086 117 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 B4GALT7Q9UBV7 327 aa13.88□□□□□ -0.19
SS18-206ENST00000577572 MAGED1Q9Y5V3 778 aaPredicted RBP13.88□□□□□ -0.19
SS18-206ENST00000577572 LINC01387J3KSC0 135 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 SLC16A6O15403 523 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 KLF4O43474 513 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 GASTP01350 101 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 ITGB2P05107 769 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 ELK4P28324 431 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 SRD5A2P31213 254 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 GSSP48637 474 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 TNFSF10P50591 281 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 IL18R1Q13478 541 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 PLPPR5Q32ZL2 321 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 SPINK14Q6IE38 97 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 RPL13AP3Q6NVV1 102 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 BORAQ6PGQ7 559 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 NRMQ8IXM6 262 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 GTPBP8Q8N3Z3 284 aaPredicted RBP13.87□□□□□ -0.19
SS18-206ENST00000577572 DHRSXQ8N5I4 330 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 OR9Q2Q8NGE9 314 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 SLC25A43Q8WUT9 341 aaPredicted RBP13.87□□□□□ -0.19
SS18-206ENST00000577572 TMEM255BQ8WV15 326 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 LIPHQ8WWY8 451 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
SS18-206ENST00000577572 ANKRD10Q9NXR5 420 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 QPCTLQ9NXS2 382 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 OSGIN1Q9UJX0 560 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 C15orf41Q9Y2V0 281 aa13.87□□□□□ -0.19
SS18-206ENST00000577572 NINQ8N4C6 2090 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 SPTBN2O15020 2390 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 TRAV17A0A0B4J275 112 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 A8MVM7 634 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 DLGAP1O14490 977 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 OSMP13725 252 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 SLC9A3P48764 834 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 FOXO1Q12778 655 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 TAF11Q15544 211 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 TMEM44Q2T9K0 475 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 OR5M10Q6IEU7 315 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 RASSF6Q6ZTQ3 369 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 OR2M7Q8NG81 312 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 RNF217Q8TC41 542 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 TFAP2CQ92754 450 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 BPIFA2Q96DR5 249 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 SIGLEC12Q96PQ1 595 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 ADI1Q9BV57 179 aa13.86□□□□□ -0.19
SS18-206ENST00000577572 POTEKPQ9BYX7 375 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms