RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, human

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCFC1R1-209	ENST00000576921	NID1	P14543	1247 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	RPS4Y1	P22090	263 aa	Known RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	ENPP1	P22413	925 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	DNASE1	P24855	282 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	IDH2	P48735	452 aa	Known RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	RAC3	P60763	192 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	SYT14P1	Q58G82	188 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	MRPL2	Q5T653	305 aa	Known RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	AP1AR	Q63HQ0	302 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	PAMR1	Q6UXH9	720 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	TUSC5	Q8IXB3	177 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CMIP	Q8IY22	773 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	PEX5L	Q8IYB4	626 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	SLC25A43	Q8WUT9	341 aa	Predicted RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	NINJ1	Q92982	152 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	DNAJA3	Q96EY1	480 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	THOC1	Q96FV9	657 aa	Known RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CCDC28B	Q9BUN5	200 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	EDAR	Q9UNE0	448 aa		18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	SPIN1	Q9Y657	262 aa	Predicted RBP	18.85	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	ADAM11	O75078	769 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	DBI	P07108	87 aa	Known RBP	18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CCNA2	P20248	432 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	APOBEC1	P41238	236 aa	Known RBP	18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	MAGEA8	P43361	318 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	DIO1	P49895	249 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	MAPK11	Q15759	364 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	NUFIP2	Q7Z417	695 aa	Known RBP	18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	GRINA	Q7Z429	371 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	GTF2H4	Q92759	462 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CCDC106	Q9BWC9	280 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	PAIP1	Q9H074	479 aa	Known RBP	18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	FANCF	Q9NPI8	374 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CALML5	Q9NZT1	146 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CCDC167	Q9P0B6	97 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	CHRNA9	Q9UGM1	479 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	PCDHB14	Q9Y5E9	798 aa		18.84	■□□□□ 0.61
HCFC1R1-209	ENST00000576921	TMEM247	A6NEH6	219 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	FES	P07332	822 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	KLK2	P20151	261 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CRISP3	P54108	245 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	BEND4	Q6ZU67	534 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	LSR	Q86X29	649 aa	Predicted RBP	18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	VRK2	Q86Y07	508 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SLC43A2	Q8N370	569 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	OR52P1P	Q8NH57	321 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SLC38A5	Q8WUX1	472 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CKAP2	Q8WWK9	683 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SPDL1	Q96EA4	605 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	PIK3IP1	Q96FE7	263 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	MAGEB18	Q96M61	343 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CACYBP	Q9HB71	228 aa	Known RBP	18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	KLHL9	Q9P2J3	617 aa		18.83	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	ITPR3	Q14573	2671 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921		A0A1W2PPR1	153 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SULT2B1	O00204	365 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CLIC1	O00299	241 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SMAD9	O15198	467 aa	Known RBP	18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SIAH2	O43255	324 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SASH3	O75995	380 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	RAF1	P04049	648 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CD1E	P15812	388 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CRYGS	P22914	178 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	MRPL19	P49406	292 aa	Known RBP	18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CSNK2A1	P68400	391 aa	Predicted RBP	18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	LIN52	Q52LA3	116 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	BLOC1S3	Q6QNY0	202 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	STAC2	Q6ZMT1	411 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	ZNF836	Q6ZNA1	936 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	FUNDC1	Q8IVP5	155 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	TMEM19	Q96HH6	336 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	OR11A1	Q9GZK7	315 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	RAD21L1	Q9H4I0	556 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	PLEKHF2	Q9H8W4	249 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	RLIM	Q9NVW2	624 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	THUMPD1	Q9NXG2	353 aa	Known RBP	18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	MED13L	Q71F56	2210 aa		18.82	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	DSPP	Q9NZW4	1301 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921		A0A096LPI6	279 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	CFAP73	A6NFT4	308 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	DEFB108A	A8MXU0	73 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	YES1	P07947	543 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	TFPT	P0C1Z6	253 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	UQCRB	P14927	111 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	RASGEF1B	Q0VAM2	473 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	KEAP1	Q14145	624 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SQLE	Q14534	574 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	RGN	Q15493	299 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	AGK	Q53H12	422 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	TFAP2E	Q6VUC0	442 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	SPNS3	Q6ZMD2	512 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	TMPPE	Q6ZT21	453 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	PMM1	Q92871	262 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	ARL5B	Q96KC2	179 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	PSD2	Q9BQI7	771 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	TACO1	Q9BSH4	297 aa	Known RBP	18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	ACTR6	Q9GZN1	396 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	GP6	Q9HCN6	339 aa		18.81	■□□□□ 0.6
HCFC1R1-209	ENST00000576921	ZNF443	Q9Y2A4	671 aa	Predicted RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms