RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 BIVMQ86UB2 503 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 LCA5Q86VQ0 697 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 P3H2Q8IVL5 708 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 C10orf107Q8IVU9 208 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 C4orf33Q8N1A6 199 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 SLC16A11Q8NCK7 471 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 OR10D3Q8NH80 312 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 POC1BQ8TC44 478 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 GIMAP5Q96F15 307 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 PERPQ96FX8 193 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 Q96MF0 132 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 GATA5Q9BWX5 397 aaPredicted RBP5.56□□□□□ -1.52
NUP88-212ENST00000576708 OR10A2Q9H208 303 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 PTGES2Q9H7Z7 377 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 LRTM1Q9HBL6 345 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 RRAGDQ9NQL2 400 aaPredicted RBP5.56□□□□□ -1.52
NUP88-212ENST00000576708 SH3BP4Q9P0V3 963 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 PROCRQ9UNN8 238 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 ABCG2Q9UNQ0 655 aa5.56□□□□□ -1.52
NUP88-212ENST00000576708 IGLV3-32A0A0A0MS00 114 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 A0A0J9YW62 118 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 A0A1W2PRB8 838 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 NPIPB8E9PQR5 432 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 SLC28A1O00337 649 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 COPEO14579 308 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 TNFSF11O14788 317 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 AZIN1O14977 448 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 RGS14O43566 566 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 EFNA2O43921 213 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 KCNK2O95069 426 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 GOSR1O95249 250 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CHRNGP07510 517 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 TBXA2RP21731 343 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 PSMA4P25789 261 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 CRHR1P34998 444 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 PRIM2P49643 509 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 RPS3AP61247 264 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 RPL38P63173 70 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 PSPHP78330 225 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 SLC18A2Q05940 514 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CD69Q07108 199 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 C17orf67Q0P5P2 114 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 GANABQ14697 944 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 PCLAFQ15004 111 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CD226Q15762 336 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CTU2Q2VPK5 515 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 PLPPR5Q32ZL2 321 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 NDUFAF6Q330K2 333 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 GALNTL6Q49A17 601 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 GLYR1Q49A26 553 aaPredicted RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 SHEQ5VZ18 495 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 MFSD12Q6NUT3 480 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 IKBIPQ70UQ0 350 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 YTHDF3Q7Z739 585 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 METTL25Q8N6Q8 603 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 OR2V1Q8NHB1 315 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 PPP1R14CQ8TAE6 165 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 FAM76AQ8TAV0 307 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 FAM110BQ8TC76 370 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 AGR3Q8TD06 166 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 UBLCP1Q8WVY7 318 aaPredicted RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 ROBO4Q8WZ75 1007 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 ZNF524Q96C55 264 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 PPCDCQ96CD2 204 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CCDC126Q96EE4 140 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 ARSGQ96EG1 525 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 DTNBP1Q96EV8 351 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 ADGRG7Q96K78 797 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 FCRL1Q96LA6 429 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 RNF145Q96MT1 663 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 FAM210AQ96ND0 272 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 CCL19Q99731 98 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 SLC39A3Q9BRY0 314 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 MECRQ9BV79 373 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 PRRG4Q9BZD6 226 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 REEP4Q9H6H4 257 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 C3orf14Q9HBI5 128 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 MED17Q9NVC6 651 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 C1orf109Q9NX04 203 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 GIN1Q9NXP7 522 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 ELOVL5Q9NYP7 299 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 ZNF226Q9NYT6 803 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 MRTO4Q9UKD2 239 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 WBP11Q9Y2W2 641 aaKnown RBP5.55□□□□□ -1.52
NUP88-212ENST00000576708 ZNF175Q9Y473 711 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 AP4B1Q9Y6B7 739 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 KCNE3Q9Y6H6 103 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 ABCA4P78363 2273 aa5.55□□□□□ -1.52
NUP88-212ENST00000576708 NIPBLQ6KC79 2804 aaeCLIP5.54□□□□□ -1.52
NUP88-212ENST00000576708 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 PIP5K1BO14986 540 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 LSM1O15116 133 aaKnown RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 ARHGEF9O43307 516 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 SS18L1O75177 396 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 PLGP00747 810 aaPredicted RBP5.54□□□□□ -1.52
NUP88-212ENST00000576708 HEXAP06865 529 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 ALOX5P09917 674 aa5.54□□□□□ -1.52
NUP88-212ENST00000576708 LAMP1P11279 417 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms