RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SYT14Q8NB59 555 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 OR51L1Q8NGJ5 315 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 LRRC46Q96FV0 321 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PIGQQ9BRB3 760 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 RBM24Q9BX46 236 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 KCNE3Q9Y6H6 103 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TRBV4-1A0A0J9YWV2 114 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 A0A1W2PS29 197 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TRABD2BA6NFA1 517 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 C21orf140B9A014 251 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 J3QLW9 94 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CYR61O00622 381 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 SLC30A4O14863 429 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PRICKLE3O43900 615 aaPredicted RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 TPOP07202 933 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 THBS1P07996 1170 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 ZNF19P17023 458 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 P2RX1P51575 399 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PCBP4P57723 403 aaKnown RBP9.31□□□□□ -0.92
SMG6-213ENST00000573166 PRICKLE4Q2TBC4 344 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 TMEM201Q5SNT2 666 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CLIP4Q8N3C7 705 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 MARVELD2Q8N4S9 558 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 OR2T4Q8NH00 348 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 CNIH3Q8TBE1 160 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 NSMAFQ92636 917 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 FAM118AQ9NWS6 357 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PLA2G3Q9NZ20 509 aa9.31□□□□□ -0.92
SMG6-213ENST00000573166 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 H0YAE9 185 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DNAJB5O75953 348 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 CT62P0C5K7 136 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 EVI2BP34910 448 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 SLC15A1P46059 708 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ERVK-25P63136 954 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ACER2Q5QJU3 275 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ALDH16A1Q8IZ83 802 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 AMER2Q8N7J2 671 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 TMEM102Q8N9M5 508 aaPredicted RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 C12orf43Q96C57 262 aaKnown RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 ZNF385DQ9H6B1 395 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 BCL2L10Q9HD36 194 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 INIPQ9NRY2 104 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 SIRT5Q9NXA8 310 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ADAM30Q9UKF2 790 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 BAIAP2Q9UQB8 552 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 SCN2AQ99250 2005 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 XPNPEP2O43895 674 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 LGI1O95970 557 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 SERPINA7P05543 415 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DRD5P21918 477 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ABCD3P28288 659 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ACVR1BP36896 505 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DNASE1L1P49184 302 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 BLVRAP53004 296 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 POU3F1Q03052 451 aaPredicted RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUSP8Q13202 625 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ZNF628Q5EBL2 1059 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 RBM48Q5RL73 367 aaKnown RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 PLBD1Q6P4A8 553 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 PTOV1Q86YD1 416 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 PLPP5Q8NEB5 264 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 KBTBD8Q8NFY9 601 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 OR5W2Q8NH69 310 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 GOT1L1Q8NHS2 421 aaPredicted RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 BRIX1Q8TDN6 353 aaKnown RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 TTC9Q92623 222 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 OR52D1Q9H346 318 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 NDUFAF4Q9P032 175 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ZNF337Q9Y3M9 751 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 CACNA1BQ00975 2339 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 A0A1B0GW55 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L2P0CJ85 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L3P0CJ86 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L4P0CJ87 422 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L5P0CJ88 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L6P0CJ89 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4L7P0CJ90 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 SMIM18P0DKX4 95 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 C7P10643 843 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ACP1P24666 158 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 CSRP3P50461 194 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 TBPL2Q6SJ96 375 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 RPTNQ6XPR3 784 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 KCTD8Q6ZWB6 473 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ANKRD9Q96BM1 317 aaPredicted RBP9.3□□□□□ -0.92
SMG6-213ENST00000573166 TM4SF19Q96DZ7 209 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 CHCHD6Q9BRQ6 235 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 AMBRA1Q9C0C7 1298 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 LHPPQ9H008 270 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 MYOTQ9UBF9 498 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 DUX4Q9UBX2 424 aa9.3□□□□□ -0.92
SMG6-213ENST00000573166 ASPDHA6ND91 283 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 CASKO14936 926 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 F13BP05160 661 aa9.29□□□□□ -0.92
SMG6-213ENST00000573166 ZNF182P17025 639 aaPredicted RBP9.29□□□□□ -0.92
SMG6-213ENST00000573166 SOX3P41225 446 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms