RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 NELFBQ8WX92 580 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 RAPGEF5Q92565 580 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 NTAN1Q96AB6 310 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM19Q96HH6 336 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 LINC00615Q96LM1 132 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 RUNDC3BQ96NL0 473 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 MCEEQ96PE7 176 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 PCDHB18PQ96TA0 734 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SIKE1Q9BRV8 207 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM109Q9BVC6 243 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 DDX47Q9H0S4 455 aaKnown RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 LRMDAQ9H2I8 198 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM165Q9HC07 324 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 PALMDQ9NP74 551 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SAR1AQ9NR31 198 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 CUTCQ9NTM9 273 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 INTS9Q9NV88 658 aaKnown RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 EURLQ9NYK6 297 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 SELENONQ9NZV5 590 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 PRELID1Q9Y255 219 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TDRKHQ9Y2W6 561 aaKnown RBP4.79□□□□□ -1.64
SF3B3-214ENST00000572365 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
SF3B3-214ENST00000572365 IGHV1-45A0A0A0MS14 117 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 A0A1B0GX78 115 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 A0A1W2PQ67 120 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 VSTM2BA6NLU5 285 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 C2orf74A8MZ97 194 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 CENPBD1B2RD01 187 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 IDSB3KWA1 339 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ANKRD66B4E2M5 251 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 H0YC42 278 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 CLDN4O14493 209 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 DVL1O14640 695 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 VEGFDO43915 354 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 FGFR1OPO95684 399 aaKnown RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 HSPA4LO95757 839 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 GAS8O95995 478 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 HEXBP07686 556 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 SP1P08047 785 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TPBGLP0DKB5 382 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TCF4P15884 667 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 HPDP32754 393 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 S100A5P33763 92 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ZFP36L2P47974 494 aaKnown RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TPD52P55327 224 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 VSX2P58304 361 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 HPCAP84074 193 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 AP1B1Q10567 949 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TNK1Q13470 666 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 EXOC3L4Q17RC7 722 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 CNPY1Q3B7I2 92 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 KRBOX4Q5JUW0 171 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 IL23RQ5VWK5 629 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 RTL6Q6ICC9 239 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM53Q6P2H8 277 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 FAM151BQ6UXP7 276 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 PPP1R21Q6ZMI0 780 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 LANCL3Q6ZV70 420 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ASRGL1Q7L266 308 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 AMIGO1Q86WK6 493 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TMEM219Q86XT9 240 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ODF3L1Q8IXM7 274 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF595Q8IYB9 648 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 KIRREL3Q8IZU9 778 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TRAM1L1Q8N609 369 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 MINDY2Q8NBR6 621 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 DDHD1Q8NEL9 900 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 Q8NFD4 153 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 CAPZA3Q96KX2 299 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 MS4A10Q96PG2 267 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ZNF184Q99676 751 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 OLFM1Q99784 485 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 UTP23Q9BRU9 249 aaKnown RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 TUBGCP2Q9BSJ2 902 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 DESI2Q9BSY9 194 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 SNRNP25Q9BV90 132 aaKnown RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 PITPNM3Q9BZ71 974 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 FAM96AQ9H5X1 160 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 NOL11Q9H8H0 719 aaKnown RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 KCNK13Q9HB14 408 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 PLGRKTQ9HBL7 147 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 SYTL2Q9HCH5 934 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 EQTNQ9NQ60 294 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 DIABLOQ9NR28 239 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 FGFR1OP2Q9NVK5 253 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 RBM22Q9NW64 420 aaKnown RBP eCLIP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ADAM22Q9P0K1 906 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 KLHL9Q9P2J3 617 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 FAF1Q9UNN5 650 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-214ENST00000572365 RABL2BQ9UNT1 228 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 COLEC10Q9Y6Z7 277 aa4.78□□□□□ -1.64
SF3B3-214ENST00000572365 ZCWPW2A0A1B0GU75 182 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 GTPBP10A4D1E9 387 aaKnown RBP4.77□□□□□ -1.65
SF3B3-214ENST00000572365 SYCE1LA8MT33 242 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 FAM166BA8MTA8 275 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 FAM25EA8MYX2 175 aa4.77□□□□□ -1.65
SF3B3-214ENST00000572365 G3V3Y1 287 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms