RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 BCAS1O75363 584 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 TRIM3O75382 744 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 CCNB2O95067 398 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RASAL1O95294 804 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ATP6V1G2O95670 118 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 EPPINO95925 133 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SFTPCP11686 197 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ANPEPP15144 967 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF17P17021 662 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 HOXB4P17483 251 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 FPR1P21462 350 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 HTR2AP28223 471 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ELK4P28324 431 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 GTF2E2P29084 291 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 TACR3P29371 465 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SRD5A2P31213 254 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RFC3P40938 356 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PTGDSP41222 190 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC1A3P43003 542 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF136P52737 540 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 GAS1P54826 345 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PPIAP62937 165 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SELENBP1Q13228 472 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PIN1Q13526 163 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 TRAM2Q15035 370 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 TAF11Q15544 211 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ST3GAL2Q16842 350 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 DCST1Q5T197 706 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF730Q6ZMV8 503 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 C20orf204Q6ZNR8 217 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 GRINAQ7Z429 371 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF227Q86WZ6 799 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RBM45Q8IUH3 476 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZDHHC13Q8IUH4 622 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SULF2Q8IWU5 870 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SVOPLQ8N434 492 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 LSMEM1Q8N8F7 131 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 FADS6Q8N9I5 356 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PAPD5Q8NDF8 572 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 CATSPER1Q8NEC5 780 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR4D11Q8NGI4 311 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR52J3Q8NH60 311 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLC25A43Q8WUT9 341 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 LRTOMTQ8WZ04 291 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 EME1Q96AY2 570 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SLCO4A1Q96BD0 722 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 DDIT4LQ96D03 193 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ARSGQ96EG1 525 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 CENPNQ96H22 339 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 C7orf34Q96L11 122 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 MRGPRX4Q96LA9 322 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SFXN2Q96NB2 322 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 FRMD6Q96NE9 622 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 GNRHR2Q96P88 292 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 EPYCQ99645 322 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PIGQQ9BRB3 760 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RTN4RQ9BZR6 473 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 NDEL1Q9GZM8 345 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SEMA6AQ9H2E6 1030 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 LDAHQ9H6V9 325 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF556Q9HAH1 456 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 NMNAT1Q9HAN9 279 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ZNF71Q9NQZ8 489 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 AGPAT4Q9NRZ5 378 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 DEPPQ9NTK1 212 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 STX18Q9P2W9 335 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RHCGQ9UBD6 479 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 STOML1Q9UBI4 398 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RIMS3Q9UJD0 308 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 FBXL2Q9UKC9 423 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PRDM4Q9UKN5 801 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 RPH3AQ9Y2J0 694 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 CHST2Q9Y4C5 530 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 PCDHGB6Q9Y5F9 930 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 ORC6Q9Y5N6 252 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 CSAG2Q9Y5P2 127 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 U3KQV3 271 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 SPTBP11277 2137 aa5.98□□□□□ -1.45
CTDNEP1-204ENST00000570484 TMED7-TICAM2A0A0A6YYA0 188 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 A0A1W2PRQ8 180 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 H3BML4 177 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 KPNA4O00629 521 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 EIF1AYO14602 144 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 SUSD5O60279 629 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 MGRN1O60291 552 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 OR10H3O60404 316 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 AHSA1O95433 338 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CRYABP02511 175 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 TFPIP10646 304 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 PRKCAP17252 672 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CCNA2P20248 432 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 POU3F2P20265 443 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 DNAJA1P31689 397 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 APOBEC1P41238 236 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 RBM34P42696 430 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 ACAA2P42765 397 aaKnown RBP5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 MAGEA5P43359 124 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 CD97P48960 835 aa5.97□□□□□ -1.45
CTDNEP1-204ENST00000570484 UGT2B15P54855 530 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms