RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 UQCRBP14927 111 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 SLC7A1P30825 629 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 HTR3AP46098 478 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 CPA2P48052 419 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 RAC3P60763 192 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 EPS8Q12929 822 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 GUSBP1Q15486 140 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 RNF220Q5VTB9 566 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 REEP3Q6NUK4 255 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 VWA1Q6PCB0 445 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF836Q6ZNA1 936 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 FAM214BQ7L5A3 538 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 BTLAQ7Z6A9 289 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 DHDDSQ86SQ9 333 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 SLC25A43Q8WUT9 341 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 REXO5Q96IC2 774 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 ANKRD27Q96NW4 1050 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 CGREF1Q99674 301 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 CCDC106Q9BWC9 280 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 SPATA9Q9BWV2 254 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 IKZF5Q9H5V7 419 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 TMEM38AQ9H6F2 299 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 COQ10BQ9H8M1 238 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 SAR1AQ9NR31 198 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 CTPS2Q9NRF8 586 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 RLIMQ9NVW2 624 aa12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF443Q9Y2A4 671 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-218ENST00000569569 A0A1W2PNR3 127 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SMNDC1O75940 238 aaKnown RBP eCLIP12.36□□□□□ -0.437e-11■■■□□ 15.1
HERPUD1-218ENST00000569569 PLGP00747 810 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ETS2P15036 469 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SLC6A2P23975 617 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ADSLP30566 484 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 KIR2DL3P43628 341 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CTBP2P56545 445 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SIRPAP78324 504 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CDK6Q00534 326 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SORDQ00796 357 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 TLE4Q04727 773 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 KLF10Q13118 480 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SNTB1Q13884 538 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 NFYCQ13952 458 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF239Q16600 458 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF311Q5JNZ3 666 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF550Q7Z398 422 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CLIP4Q8N3C7 705 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ROBO4Q8WZ75 1007 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 OR5B2Q96R09 309 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ZNF559Q9BR84 538 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CPPED1Q9BRF8 314 aaPredicted RBP12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 SRXN1Q9BYN0 137 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CHRNA9Q9UGM1 479 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 EMC9Q9Y3B6 208 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 ABCA4P78363 2273 aa12.36□□□□□ -0.43
HERPUD1-218ENST00000569569 CREBBPQ92793 2442 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 AP3D1O14617 1153 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SS18L1O75177 396 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 CGAP01215 116 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 CD8BP10966 210 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SLC1A3P43003 542 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 CLK1P49759 484 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 MAP2K6P52564 334 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 COPZ1P61923 177 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 MYBPHQ13203 477 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SCARB2Q14108 478 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 RNPS1Q15287 305 aaKnown RBP12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 MAPRE2Q15555 327 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 ADRM1Q16186 407 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 MMEL1Q495T6 779 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SYT14P1Q58G82 188 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 TMPPEQ6ZT21 453 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 FCRLAQ7L513 359 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SLC43A2Q8N370 569 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 OR6K3Q8NGY3 331 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 C10orf82Q8WW14 230 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 SPATA5L1Q9BVQ7 753 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 MCCC2Q9HCC0 563 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 PLSCR4Q9NRQ2 329 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 GALNT8Q9NY28 637 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 CLEC4AQ9UMR7 237 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 CHST2Q9Y4C5 530 aa12.35□□□□□ -0.43
HERPUD1-218ENST00000569569 TMED7-TICAM2A0A0A6YYA0 188 aa12.34□□□□□ -0.43
HERPUD1-218ENST00000569569 TUBAL3A6NHL2 446 aa12.34□□□□□ -0.43
HERPUD1-218ENST00000569569 SULT2B1O00204 365 aa12.34□□□□□ -0.43
HERPUD1-218ENST00000569569 FBP2O00757 339 aa12.34□□□□□ -0.43
HERPUD1-218ENST00000569569 PRKD3O94806 890 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms